Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01986 ATGGGTTCATTCTCTGGCACTTCTGAAATAGTTGAAGCAACAGACGAGCTAAATACAGGGAAAACTACAGCAAGTAATCAGTCCAATAATGGGTGTAGCATAGCTGAGAAAAATCAGAAGCCTCCGGTGCTGAAACTGGGCTACAAGGACAATCTGGACGACGATATTAATAAGCTTTTTGAATCAATTACTCTTAAATCTTCATCAAGAGACTTGGGCCATTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAGCCCATCACAGTGGGTGTTTCTCGGTCCCCGCGAGTTGGGACATCTGAACCTGTGAATTTGAAGCAGGCTTTAAGAGACCTTTGTATTTCTAAGGCATCAGAAATGGCTGCTATGAAACGATTATCAAAAGCAACAGCTTCTCCAAGAATATCAGAGGTTGGGAAGATACAAACATTGTACAATTCAGTTGTAGCTGAAACCAGTCTACCTGGCCCTCCTTTGGTTGAAAATAAAGAGAATGGAATTGAAATATCCCTAGTGCCAGAAGAAAGTAAGTCAGTTTCGATGGAGAAAACATCTCATTCTTATCAAGGTGCTGAAATCACTTCACCAAGCCAGATCATTCGATCTTCTCCTAAAGTTGCTGTTGCAACCATTCAACATACTTCTAAGGCTTCATTGCCGCAAGTTGATTTGGCATGTTCATCAAGTAAAGTTGGGGTTCACTCACGGCAAGTGGTGCCTGTTCAATCAGAAAAACCACCAACATCTCCCTCTCCATCTCCATGTACCACAACTGGAAGCAAATTGGAGTCATCCAAAATTGTTTCTTCTCCTAAAAAAGTTGGAAATAAACCATCTATATCAAATAATGGGCATAAAGGTAGATTGCAAACATCTTCCTCATCTTCTTCTGTAAATGGCTATAGAGTAAACAAAGTGTCATGTCATACCCCCCGTGCAGTCAAATCAGTCCTCAAGAGCAAGAATTTGAGTAAGAAAAAGCTAAAGGAGTGTTCAGGCTCTGGTTTGTGCAATCCTTCAACCAATAAAGTGAATAATAAGCCAGCTCCTGTTCTAACTCGAATGATTTGCGAGAGATGTCATTGTGCTTTAGAGAATACAAGTGAAGAAAAAGGCCACCATATCACAACACTGGACTCCATCAGTCCTGAAGTGGTGAACTCAGGTGAAGAGCACCATGGTTCAGATAAACCTGATCTGGCATCAACTAACAGTAACAAAGGCAGACCGATTGCAAACGTGAAAAAGAGCACTAAGTTGAAAGACCAACTTGAATTTTCACAAAGTTCAAAAAGTAGCCAAGGTGAGTACAGTAGTAGCACAAGCACCAGTGGCGAAAGTAATGCAAGTGGCTCAAGTTGTGGAACTAGGCCTCACATGTCAAAAGATTTTAGGTGGGAAGCCGTACGACGTGCTCATTTGGAGTATGGAGTCTTGGGCTTGAGACATTTCAATCTTTTGAAGAAACTTGGTTGTGGGGACATTGGGACAGTATATCTTGCTGAACTAATTGGCACAACTTGCTTGTTTGCTATCAAGGTCATGGATAATGAGTTTTTGGCAAGGCGGAAGAAGATGCCAAGGGCACAAACTGAGAGAGAAATATTAAGCATGCTGGATCATCCATTTCTTCCCACATTGTATGCACAATTTACATCAGATAATCTGTCATGCCTGGTTATGGAGTATTGTCCAGGGGGAGATCTTCACGTTCTACGTCAGAAGCAGCTTAGTAGGTGTTTTTCAGAGACAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTAGAGTACTTGCACATGCTTGGAGTTGTTTATCGTGACTTGAAACCTGAAAACATTCTTGTCCGGGAAGATGGACACATTATGCTCACAGATTTTGACCTTTCACTAAGGTGTGCAGTTAGCCCAACGCTTCTACAATCCTCTTCCGAGAATGAACCAGCAAAAAGTTCTGGCCCTACCACAAAACCAAGTTGCATTGAGCCATTCTGCATTGAGCCCTCTTGTCAAGTTCCATGCTTCAGCCCTAGATTCTTACCCGCAGCAGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGATTAGATCATTGCCACAGCTTGTGGCCGAGCCCACCGATGCCAGATCAAACTCATTTGTTGGAACACATGAATACTTGGCTCCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGACTGGTGGACGTTTGGGGTTTTTCTTTACGAGCTCTTATATGGTAGAACACCCTTCAAAGGCTGCAATAATGAAGAAACACTAGTGAACGTGGTGTTGCAGAGTCTTAGGTTCCCAGACAGCCCATTTGTTAGCTTCCAAGCGAGGGATCTGATAAGAGGGTTGCTGGTTAAGGAACCTGAGAACCGTTTGGGATCAGAGAAAGGTGCTGCTGAGATTAAACAGCATCCTTTCTTTGATGGCCTCAACTGGGCCTTAATTCGTTGTGGTCTCCCACCAGAGATTCCAGAGTATTGTGATTTTGGAGTTTCTGATGTGACACCAGAAAGCAAGGGTGGTAAGTATTTAGAGTATAATGCAACTGGAGAGCATCTGGAGTTCGAGTTGTTCTAG 2616 0.4285 MGSFSGTSEIVEATDELNTGKTTASNQSNNGCSIAEKNQKPPVLKLGYKDNLDDDINKLFESITLKSSSRDLGHLQDGTSPKMKSALKKPITVGVSRSPRVGTSEPVNLKQALRDLCISKASEMAAMKRLSKATASPRISEVGKIQTLYNSVVAETSLPGPPLVENKENGIEISLVPEESKSVSMEKTSHSYQGAEITSPSQIIRSSPKVAVATIQHTSKASLPQVDLACSSSKVGVHSRQVVPVQSEKPPTSPSPSPCTTTGSKLESSKIVSSPKKVGNKPSISNNGHKGRLQTSSSSSSVNGYRVNKVSCHTPRAVKSVLKSKNLSKKKLKECSGSGLCNPSTNKVNNKPAPVLTRMICERCHCALENTSEEKGHHITTLDSISPEVVNSGEEHHGSDKPDLASTNSNKGRPIANVKKSTKLKDQLEFSQSSKSSQGEYSSSTSTSGESNASGSSCGTRPHMSKDFRWEAVRRAHLEYGVLGLRHFNLLKKLGCGDIGTVYLAELIGTTCLFAIKVMDNEFLARRKKMPRAQTEREILSMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLSRCFSETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLQSSSENEPAKSSGPTTKPSCIEPFCIEPSCQVPCFSPRFLPAAAKARKLKVDLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGCNNEETLVNVVLQSLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFDGLNWALIRCGLPPEIPEYCDFGVSDVTPESKGGKYLEYNATGEHLEFELF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01986 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Aip06g01986 871 MobiDBLite consensus disorder prediction 258 308 - -
Aip06g01986 871 Pfam Protein kinase domain 489 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01986 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01986 871 MobiDBLite consensus disorder prediction 1 40 - -
Aip06g01986 871 MobiDBLite consensus disorder prediction 427 461 - -
Aip06g01986 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
Aip06g01986 871 CDD STKc_phototropin_like 486 838 - -
Aip06g01986 871 Gene3D Transferase(Phosphotransferase) domain 1 572 637 - -
Aip06g01986 871 Gene3D Transferase(Phosphotransferase) domain 1 713 829 - -
Aip06g01986 871 ProSiteProfiles Protein kinase domain profile. 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01986 871 MobiDBLite consensus disorder prediction 239 308 - -
Aip06g01986 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Aip06g01986 871 MobiDBLite consensus disorder prediction 389 461 - -
Aip06g01986 871 SMART serkin_6 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01986 871 MobiDBLite consensus disorder prediction 1 36 - -
Aip06g01986 871 SUPERFAMILY Protein kinase-like (PK-like) 465 839 IPR011009 -
Aip06g01986 871 Gene3D Phosphorylase Kinase; domain 1 487 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01986 Aip-Chr6 84284279 84289307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01986 1 871 AGC Kinase Gene Family AT2G36350 52.296 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip06g01986 Pkinase 5.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01986 - K08286 gmx:100792120 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01986 06 84284279 84289307 Aip02g03243 02 109193733 109198549 PCT