Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01978 ATGAAGGTATTGGAGGCAAGAGCTGGGTTCTATGAAAAGCCAATTGCTACAATAGATTTTGCATCACTACATCCATTTATTATGATGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATTAGTGAACAAAACTCTGGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 240 0.3708 MKVLEARAGFYEKPIATIDFASLHPFIMMAYNLCYCTLVTPEDVRKLNLPPELVNKTLGETFVKSNLQKASIGMDNLNA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01978 79 SUPERFAMILY DNA/RNA polymerases 2 53 IPR043502 -
Aip06g01978 79 Pfam DNA polymerase family B 2 53 IPR006134 GO:0000166|GO:0003677
Aip06g01978 79 Gene3D Palm domain of DNA polymerase 3 76 IPR023211 -
Aip06g01978 79 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 3 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01978 Aip-Chr6 83750283 83751528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01978 3 70 Core DNA Replication Machinery Family AT5G63960 84.058 6.21e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01978 K02327 - aip:107619773 147.902