Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01964 ATGGGTCACAAGTCCATGTTACAGGAGCTTCTGAAAGAAGAGCAAGAGCCTTTCCTGCTAAACAAGTACATTTCCGATAGGAGAACCCACATGAAGACCACCACTACTACTCTCGTCAACAACAAACAACGCAGCACAACTTTCCCACTCAATCTCTGCAAGAACGCATGCTTCTCCACCTCCACTACCACCACCACCACCAAATCCCCTCTCTTGGAATTCCCATCGCCCAATAATAACAAGAAGCCCATATTCCTTCACATTCCTTCTCGAACCGCCGCGCTTCTTCTCGAAGCCGCTCTCAGGATCCACAAACACAAGAAGACCAATCACGGCTTCGGCCTATTGGGCTCCTTCTTCAGGAGACTAAAGCAGAACCGCCGCAAGCACAAGCTCAAGGTGAGCTCCCTCAAAGATCGAGAAAATGTGATTAATAGATCCTACGAGTTGGGGTTTCGATGTTCATACTCTGTTTGGTCAGAGAGCAACGATGATGAGTCTCTCGACATGGAAACCTCAAGTAGCACTAGTACAAACTTTGATGACCACCACCACCACCATATTATTCACAATGGAGGATTCTTTGAAAGCCCATTCCGTTTTGTTCTTCAAAAGAGCCCCTCCTCCTCCTCCGGCCTCAACACGCCGGAGCTACCTTCACCTCCGCCCTCATCACCACAGACTCCCCACACTACGCAGGACAAAGAAAGTAACGGCGGTGAGAGTGTGCATAAATTCCAATCGGGGGAACTAGAAGAAGAAGATAAGGAACAGTGTAGTCCCGTGTCTGTTCTAGACCCACCCTTCGAGGACGATGACGAAGCGCATGGAAACGACGAGGAGGACGAAAATGAGGAGCATGGTTTCGATTTGGAGTGCAGCTATGCCATAATGCAGAGAACTAAGCAGCAGCTATTGTACAAGCTTCGTAGATTCGAGAAACTCGCGGGGCTAGATCCGGTAGAACTCGAGAAAATAATGCTGGATCAAGAAGAGGAGGAGGATGAAACGGTCATGGAAGATGATGGATATGTATACGAGGCCAGTGAAGCATTATCGTGTAAAGAAAATGGCTTGATAGAACAAGTATTTGAAGCTCTCTTTGAGTCATCAAGACTTCAATTCCCAGAAGGCCTTAAGAGACTTGTATCTGATGTCATTGCAGAGGAAGAGAGGGAAATTGAGTGCTTAGAAGATTATAATCATAGGGACATGGTGGTGAGAAAGGTGTGCAAGAGAATGGAGCTTTGGAAACAAGTGGAGTCAAACACAATTGACATGATGATAGAAGAAGATTTTACTAGAGAAGAGGAAAATGGTTGGAAGAAGAAAAATGTGGATCAGATAAGGGACATGGCTGGGGAGCTTGAACTTGCTATCTTTGGGTTTCTAGTTGAAGAATTCTCAGAGGAGCTAGAATGTTAA 1425 0.4618 MGHKSMLQELLKEEQEPFLLNKYISDRRTHMKTTTTTLVNNKQRSTTFPLNLCKNACFSTSTTTTTTKSPLLEFPSPNNNKKPIFLHIPSRTAALLLEAALRIHKHKKTNHGFGLLGSFFRRLKQNRRKHKLKVSSLKDRENVINRSYELGFRCSYSVWSESNDDESLDMETSSSTSTNFDDHHHHHIIHNGGFFESPFRFVLQKSPSSSSGLNTPELPSPPPSSPQTPHTTQDKESNGGESVHKFQSGELEEEDKEQCSPVSVLDPPFEDDDEAHGNDEEDENEEHGFDLECSYAIMQRTKQQLLYKLRRFEKLAGLDPVELEKIMLDQEEEEDETVMEDDGYVYEASEALSCKENGLIEQVFEALFESSRLQFPEGLKRLVSDVIAEEEREIECLEDYNHRDMVVRKVCKRMELWKQVESNTIDMMIEEDFTREEENGWKKKNVDQIRDMAGELELAIFGFLVEEFSEELEC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01964 474 MobiDBLite consensus disorder prediction 205 287 - -
Aip06g01964 474 MobiDBLite consensus disorder prediction 237 260 - -
Aip06g01964 474 MobiDBLite consensus disorder prediction 272 287 - -
Aip06g01964 474 PANTHER OS04G0572500 PROTEIN 2 474 - -
Aip06g01964 474 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 2 474 - -
Aip06g01964 474 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01964 Aip-Chr6 81035299 81038456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01964 4 472 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.267 4.25e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01964 - - gmx:100790018 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01964 06 81035299 81038456 Aip06g01964 06 81035299 81038456 ECH
Aip06g01964 06 81035299 81038456 Aip02g03246 02 109241068 109244837 PCT