Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01956 ATGTTCACAAGGGCACATACGCGCACAAGCCGCCTCCACGCGGGGAAGCAAGTTTGGAGATCCAAGCGCACGCACGCACGCATAGTGCGCACGCGTGGATTGAGGATTAGCGTTCACCAACAACAAACACTACGTTCATTTCGAGTGAACGCCTGCAATACTTTCAGAGTGGGAAAAAGGAAATCGACGCGCACGCGCACATGTTGCGCCCGCGCCGATGGAATAAAATTAGCGATGGATGCAGATGCGTACAAAACGCTGGAACGCAGAATTGATATGTGGCTATACacgtgcaagcgcacaaggcgagcacgcGTTTTGGCAACTGCTGTAGTTGTTGGATTGGTGGCTCGTATTTGTGGCCAGGTTGGTCCTGCAGCTATCGTCATTGGGAGTGGCCTCACATTATCATTGACTGCTGTTGTTCTACAGGTAAATAACCTCACTACTATACAGGTAAATAACAGAGACTGCAAGAAATTATCTATTACAATTAACATCCAAGCCAACAGATACCTTGCCCCTCAGAAGCCTTTTGCTAAGGAGGTAACATCTTATTACAATAAGTTTCGTGCGGTGAATGGTTGGGCCTTTGACATTCTCGGTTGGGGATTCTCTGATCTAGAAAAACTTACTTCATGTGATGTGGTATCAAAGCACGAACACTTCTATCAGTTTTGCAAGTCTTACATCAAAAGGCCAATGATATTGGTTAGACCAAGCCTTGGTTCTACTGTTGCCATTGATTTTGCAGTCAATTATCCAGAAGTTGTGGAAAAGCTTGTTTTGATTGATGCTAGTATATATACAGAGGGAACAGGAAACCTAGCAACCTTACCTAGACTTATAGCAACCTTACCTTATATTTTGCAACAAAAGATAGTTAGACTTACAAAAGTAATAAGATCTGTTGATTTCAGATGTGTTACTCCAACTTCATCAAGATTTGCCAATAATAACAATAATAATGATGCACTAGTTCCAGCAACTAAGAATATCAATAGGCCTAGCATGGTGGTGAATGTGAAGGTCTTGAAGAAGCTGTTATCTATTAACAACTATCAAAAGAAACCAAGAAGGAGAGTTGTTAAAAATGTTGCTTCTCAATCATTGGAAGTGAAGAAGCTCATGTACTTGTACCTCCTTCATTATGCTGAAAAGTATAATGCTCATGAAAAGATAGTAAACTTTATGGCCCCTCAACCGATGAATCTTCCTCCTAAGGATCCAAAGTTATTTGAGAATTTGTTCGGATTGAAGACTCAAAGATCATCTACTGCAGCCTCATAA 1290 0.4047 MFTRAHTRTSRLHAGKQVWRSKRTHARIVRTRGLRISVHQQQTLRSFRVNACNTFRVGKRKSTRTRTCCARADGIKLAMDADAYKTLERRIDMWLYTCKRTRRARVLATAVVVGLVARICGQVGPAAIVIGSGLTLSLTAVVLQVNNLTTIQVNNRDCKKLSITINIQANRYLAPQKPFAKEVTSYYNKFRAVNGWAFDILGWGFSDLEKLTSCDVVSKHEHFYQFCKSYIKRPMILVRPSLGSTVAIDFAVNYPEVVEKLVLIDASIYTEGTGNLATLPRLIATLPYILQQKIVRLTKVIRSVDFRCVTPTSSRFANNNNNNDALVPATKNINRPSMVVNVKVLKKLLSINNYQKKPRRRVVKNVASQSLEVKKLMYLYLLHYAEKYNAHEKIVNFMAPQPMNLPPKDPKLFENLFGLKTQRSSTAAS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01956 429 PANTHER HYDROLASE 193 286 - -
Aip06g01956 429 Gene3D alpha/beta hydrolase 178 399 IPR029058 -
Aip06g01956 429 PANTHER ALPHA/BETA FOLD HYDROLASE 193 286 - -
Aip06g01956 429 SUPERFAMILY alpha/beta-Hydrolases 196 289 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01956 Aip-Chr6 79189450 79207788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01956 104 145 Inorganic Solute Cotransporters AT1G01790 72.093 2.74e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01956 - - mtr:MTR_4g083080 160.614