Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01953 ATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGAAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTAATGTGAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGATTCTTAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATTTAGGAGGTGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTACATGAAGAACCCCCTCACTCATCATGGACGATCGCACAAGCAGCGGCCATGACTTCCACCTTGCGTTTGGATGAAATAGGGCTCATCGGTAGAAACGGCGTCGTTTGGCACTTCAGGGACGAATTTGTCCACTAA 561 0.4367 MRASGLLLKFLEAILKAGNRMNAETSRGNAQGFNLSALRKLPNVKSIDGKTSLLHFIVEQILNARVSEIREIVTKCCGENNERGGFVKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDLVHEEPPHSSWTIAQAAAMTSTLRLDEIGLIGRNGVVWHFRDEFVH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01953 186 Coils Coil 87 107 - -
Aip06g01953 186 PANTHER FORMIN-RELATED 62 142 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip06g01953 186 Pfam Formin Homology 2 Domain 2 63 IPR015425 -
Aip06g01953 186 Gene3D Formin, FH2 domain 65 144 IPR042201 -
Aip06g01953 186 PANTHER FORMIN-RELATED 1 63 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip06g01953 186 Gene3D Formin, FH2 domain 1 64 IPR042201 -
Aip06g01953 186 PANTHER FORMIN-LIKE PROTEIN 62 142 - -
Aip06g01953 186 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 142 - -
Aip06g01953 186 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 186 IPR015425 -
Aip06g01953 186 PANTHER FORMIN-LIKE PROTEIN 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01953 Aip-Chr6 78438040 78438834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01953 1 142 FH2 protein (formin) Gene Family AT1G59910 38.863 9.54e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01953 - - aip:107640085 160.999