Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01925 ATGAGGCATCTTTTTGGAACTTGGAAGGGATACATTCCTCCGCAGACCCTTCAGATGATTGAAAAGGAACTTGGCTTCATGCCTGCAGTCAATGGTTCGGCTTCTTCATCTGCTACACTCGGAAGTGAATCACAGTCACAACGCCCAGCTCATAGCATCCATGTGAATCCCAAGTATTTAGAACGGCAGCGTCTTCAGCAATCCAGCAGGATTAAAGGAGTAGCTAATGATACGACTAGAGCTATTTTGAACTCAAATGAGGATTCAGAGAGGCCAAGTAGAGTTTTGGGTGCTTCACGACCGTGGCTCGATCCTAGGATTAACATGCATGTATGTAGACGTATTCAAAGAGATGCATATAACAATTCTGTTCCTGAGAAGAGTTTAGCTGAATCCTATGGGGGCATGAAAAATAGTTCTGGTATTTCAAGTATTGGAAGAACTGGCAGTAGGGTTGCTGAGTTGGGACATGATAAAACTTGGTATAAAGCAGGACTCAGCGTGGCAGAGAACACATCTAATCAAAGTAATGGTTTCAGTTTGAAGCTTGGTTTTTCGAATTGTGAAGCACCAAAGTCGATGAACTTGGGTGCACATCATCAGCCAACACAAAACTTAACTAGCATACAGAGCAGTGTAGTGCCAGGTAGCTGGAAAAATTCTGAGGAAGAGGAATTCATGTGGGATGAAATGAACTCTGGAATGATTGGTGATGGTGCCGCCAGCGTTGCCAACAACTTGAATACAGAACGATGGATGGGTGGTGATGATGAGAATTTGGATGGAGATCAATCCCAAATCTTGCACCATGATAGAGAAATATCTACTGCTAGGAAACAATCATTTGCATCTGGGGGGCATTCATCATTGCCATGGCAATTGCAGGAGCAGAGATCGAATGAAAAGTTGAATCTGAAGCCAGGTCACTCGGAAGAATTGTTGTCAGCTTTAGGTTGCTTACCAGCTAATACAAGTTCTTTGGTTGTCAGGATGGCAAATCGGTCTTCCATGCCAAATGCAACCAAAGGTATGTCTGAAACTATGGGACAAAAGCAATTTGATTCCATGGGAACAAAACCCACTTCTGCGCAGTCACCTTTGCAGCAGCAGTCTGCATCATTGCCTGTAACAAAGCTCCACCCTCATCCAACACAAAATTTGTTGGAGCAAGACTATGGGAAGGATTCTAAAACATCACAGTTTCTGGGAGATCTGCAGAGACAATACATTAGAGATCAACCAGCTGCCCTTCCTCCCAATGCTCAAGTTGGTTGTTTGCATAGATCTAGAGAAAAGGATTTGCATGGTCCTTTATCTTCAGAGACTTCTTTTCTGCCAAGGCATCAGCAGCAGCCACTGGTCTCTTCCCAGACTGAAGTTATTGCAAAAACTAAGAAGCCTCTCCACTCTAAAGTCAAGGCCAGTGAAAGTTCAGAACAATCAAAAAGTAGTTTGTCAGCTGCAACTGTGCAGACTAGATTCCTCAACAAATCAATTACAAATAGTTTTCCTGGTACAAGTAGTAGTCTAGTTACAAAGAATCTTCCATCTGACTTAGGGGTTTGCCCAGCTCTATCAGGTAGACCTTCGCCTGCCACATTAATTTCTTCGGTATCTGCAGTTGCATCACCGTCAACATTAGTTCCTCCAGATGACGATTCTTCTATTCTGGATAACATATCACAAGCAAATACTGGACAGAAACCAAAGGTCTCTACAAAATTACCAACTTCCTCTAACATGAGCAGTGTGTCAGCTCCAACCTCAACTGCTACAAAAAACAATTCCTTGAATCCCATTGCAAACCTTTTAAGCTCACTGGTTGCAAAAGGTTTGATATCTACAGATTCGGAGTCATCGATTAAGGTACCAACAGAGGCATTGGTTCAATTGGAAACGCGTACTGAAAGCATTACTGCCAGTAGCTCATTGCCAGTTCCTTCAGTTACTGGTTCCACAGTTCTCCCAGTAACATCCTCTAAAGTTGTGGAAGATGATGCAAAAGCCTCCCTGATCGTAAGTCAATCAACCAACACCAAAATAAGGAATATCATCGGCTTTGATTTTAAGCCTGATGTAATCCGAGAGATGCATCCCACTGTAATCAAGGGATTATTGGATGATAGTCAACATCATTGCAGATTTTGTGGTATTAAGCTTAAACAGGAAGAACAGTTCAACAAACACTTGGAGTGGCATTTTGCACGAGAAAGAGAGCAACATGGTCTAATTACAGCATCCAGAAAATGGTATGAGAATTGTTTTTCGTCTGAGCCTAGTGATTCTGTAGACGATTATTGTGAGGAAACAGACAGGAGTCCATTTGATGCTATCGTTCCAGCTGATGACAGCCAGTGCTTGTGTGTATTGTGTGGTGATCTGTTTGAAGATGTGTACTGTCAAGAGAGGGATGAATGGATGTTCGAAGGTGCTGTTTACATAAACAACTTAGATAGAAACGGTGAGATGGAAAATAGAAATGTGGGGCCGATTGTTCATGCTAAATGTTTATCTGAGAACTCAGTAGCTGGCAGCACCAAGATGGAACAGGACTGA 2556 0.4261 MRHLFGTWKGYIPPQTLQMIEKELGFMPAVNGSASSSATLGSESQSQRPAHSIHVNPKYLERQRLQQSSRIKGVANDTTRAILNSNEDSERPSRVLGASRPWLDPRINMHVCRRIQRDAYNNSVPEKSLAESYGGMKNSSGISSIGRTGSRVAELGHDKTWYKAGLSVAENTSNQSNGFSLKLGFSNCEAPKSMNLGAHHQPTQNLTSIQSSVVPGSWKNSEEEEFMWDEMNSGMIGDGAASVANNLNTERWMGGDDENLDGDQSQILHHDREISTARKQSFASGGHSSLPWQLQEQRSNEKLNLKPGHSEELLSALGCLPANTSSLVVRMANRSSMPNATKGMSETMGQKQFDSMGTKPTSAQSPLQQQSASLPVTKLHPHPTQNLLEQDYGKDSKTSQFLGDLQRQYIRDQPAALPPNAQVGCLHRSREKDLHGPLSSETSFLPRHQQQPLVSSQTEVIAKTKKPLHSKVKASESSEQSKSSLSAATVQTRFLNKSITNSFPGTSSSLVTKNLPSDLGVCPALSGRPSPATLISSVSAVASPSTLVPPDDDSSILDNISQANTGQKPKVSTKLPTSSNMSSVSAPTSTATKNNSLNPIANLLSSLVAKGLISTDSESSIKVPTEALVQLETRTESITASSSLPVPSVTGSTVLPVTSSKVVEDDAKASLIVSQSTNTKIRNIIGFDFKPDVIREMHPTVIKGLLDDSQHHCRFCGIKLKQEEQFNKHLEWHFAREREQHGLITASRKWYENCFSSEPSDSVDDYCEETDRSPFDAIVPADDSQCLCVLCGDLFEDVYCQERDEWMFEGAVYINNLDRNGEMENRNVGPIVHAKCLSENSVAGSTKMEQD 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01925 851 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 844 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 442 463 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 431 487 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 33 52 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 543 592 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 61 92 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 337 372 - -
Aip06g01925 851 MobiDBLite consensus disorder prediction 33 97 - -
Aip06g01925 851 ProSitePatterns Zinc finger C2H2 type domain signature. 713 733 IPR013087 -
Aip06g01925 851 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 844 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01925 Aip-Chr6 74390654 74396940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01925 685 839 C2H2 Transcription Factor Family AT4G04885 33.136 1.68e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01925 K14400 - gmx:100811629 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01925 06 74390654 74396940 Aip06g01925 06 74390654 74396940 ECH
Aip06g01925 06 74390654 74396940 Aip02g03253 02 109327086 109333722 PCT