Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01903 ATGGAGAATGATGGCAAAGAGTCGTATAAAGATGGTGATCAATCTGAAGATTTAAGTGTTGAGTATGAGTGCAGTTCTGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGTTGAGGAAGATATAATTAATGCTGGTGGTTTGGAAAAGTTGATAACTGATTTGACCATCGAAGACATATGGGGATTGGTGTTTGATACAGAATCTCATGTTTGTGAATTTTATGCCAAGTATGCCAGGTGCTATAGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGCTAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAACATAGGGCAATTACTCGTGTCAACTGCAGGGCGAGGATTCGGTTCATTCGTCACTATAGAACGGGTAAGTGGAAAGTTAGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTTCAGACATCTTATTATCGCGAATTGTGGGCTTGATGAGGCCGATAAAACACAAGTAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACACTAGTAAGACTAGGCATGGGAAAGTGAAAGACGGTGATGCATTTGCTGCGTTGGCCTATCTATTTTCTAAGGCAGACAATGACCCGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGGTTGGAGAATTTGGTTTGGGCTGATGGAGAAAGCGTTGTTGATTACGAATGTTTTGGCGATGTACTGGCTTTTGGCACTACTTACAAGAAAAATGTATACAACAAGCTCTTAGTTATATTTTCAAGGACCAACCACCATGGCCAGACAACTATCTTTGGATGCGCTCTGCTCTCAGATGAAAGGTCCGTAACTTTCAAGTGGGCACTGAAGGAATTTTCGGAAATCATGTCAGGAAAACTATCCGGAGGCGTTGTGACAGACGGAGATCGTGCTATGAGAGATGCTATCTTAGAAGTATTTCATGGTATACCACACCGCCTTTGTGCATGGCATCTCCATCGTAATGCGAGATGGAATGAGATCATATCCAAATACGGACTTGTCGAGAATGAATGGGTCCAAGCCATTTATAATGACAGAATGAAGTGCGCTACCGCATATTTGAAGGAGCACTTTTTTGGCCGCATAAGAACTACATCACAGTGTGAGGGAATTCATTCATTATTGAAGAACTATGTTGACAGTAAAACCAATCTCCTTGAATTCATGCATAAATTTTGTGAAGTAGTAAGGCATTACCGAAACAACCATCTTACTGCTGACTTTGAAACCTTTTATAAGTTTCCTGTTTTGACTACGTGCTTGGAAAGTTTTGAGAAACAAGCTGCTGAACTTTATACTAGAAATATTTTCAAACTTGTGAAAGATGAGATAGAAGCAGCAGGTGCCTTAAATGTGACTGAATACCCAAACAGTGGAGACATTGTTGAGTACAACACGACTGACTATAGGGAAATCTCAGGTGAGTTACTTAAGCTAATTTCGAAGGTGCAAAATAAAGGTGATGCACAAGCGAGGCTTTCCCCCACGTCAGCGCTAATAGGTGATCCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGGTTCCAAAAGGCCAAAAGAGGCGAAGATGTTCACATTGTAAGTTAAGCAGGCATTTCGTTAGGACATGTCTATTACTCGCCAAGGAGGACTCCCGTGCCGAATACTCAAATGCTGAAGATGAACCAATGACCGAAGAAATCACTCTAACTCAAGAGACATTAAAAGATAAGACCAACACATCAGGAATTGAGGTGACCAAAGTTCCAGATGTAGCCACAACCAAGATACCAGGATTACCACAATATCCTATGCATCATTATCCAGTGGTCCTTCCTTATCAACCTTATGGTGGAGTCCTCCCTATTCCTTTTCATCATGTTTCAAATGGCATGGCGTACTTCAACCAATATCCTTCTACTGCCGGAATACATCATATCCTCAGTTTTCTCATATCTCATCGGATGACCCTACTCTTTTATAATCATGAGAGTCCGTCTATTCTGAAGTTATCCTTGAGGCTTCAAGTTCTTTCACTGTGCTGTGCTGGATCTAAGGCTATCAATGATCCAAAAGCTTCATGTCAAAGAAAGCTCTATAGCAGTTTTATGCAGTTATTGAGAGAAATAACTGCCAAGAAGTTGGATATTTTGGAGTTAAATGGGCATGATACCGGTGACCAAAGTTCTGATGGAAGTATAATTGGCGAGACATCAAATTTACTGTACGAAGAGGATGGCACCGTTTCTCTTAAGATTCACTTTGATGATGGAGATTTGGATGATGATGGGATTGAGCCTGCAATTAGGGAAAAAATTGACAGAACAAAGGCCTCTTCTGGTTGCCACATAAACTACAACATGAATTCAGGAATGAGGTATCTGAATGAGGACCCTTGGATATTGAAGATCTTGCAAACCTACTACGGCTCTAGAAGCATGGTTGTGAGAGCTGATCTTCTTGTCCTTCCATATCAATCTCTTTTGTCAAAATCATCTCGTGAAGCTCTTGGTCTGAATTTGAAATCCAATATTGATAATAGATGA 2703 0.4081 MENDGKESYKDGDQSEDLSVEYECSSDESDDMVDVTVDEVEEDIINAGGLEKLITDLTIEDIWGLVFDTESHVCEFYAKYARCYRFVSRKDLKTVDANGNINTRQLVCNKAGERHWKHLKRDNRQREHRAITRVNCRARIRFIRHYRTGKWKVSVFESEHNHPLCPPKFRHLIIANCGLDEADKTQVDSLRACGVKTCHIMGYMVSQKGGYDKVGFTSKDLHNHTSKTRHGKVKDGDAFAALAYLFSKADNDPLFLGKFTLKDGRLENLVWADGESVVDYECFGDVLAFGTTYKKNVYNKLLVIFSRTNHHGQTTIFGCALLSDERSVTFKWALKEFSEIMSGKLSGGVVTDGDRAMRDAILEVFHGIPHRLCAWHLHRNARWNEIISKYGLVENEWVQAIYNDRMKCATAYLKEHFFGRIRTTSQCEGIHSLLKNYVDSKTNLLEFMHKFCEVVRHYRNNHLTADFETFYKFPVLTTCLESFEKQAAELYTRNIFKLVKDEIEAAGALNVTEYPNSGDIVEYNTTDYREISGELLKLISKVQNKGDAQARLSPTSALIGDPAVVKSKGAPRKVPKGQKRRRCSHCKLSRHFVRTCLLLAKEDSRAEYSNAEDEPMTEEITLTQETLKDKTNTSGIEVTKVPDVATTKIPGLPQYPMHHYPVVLPYQPYGGVLPIPFHHVSNGMAYFNQYPSTAGIHHILSFLISHRMTLLFYNHESPSILKLSLRLQVLSLCCAGSKAINDPKASCQRKLYSSFMQLLREITAKKLDILELNGHDTGDQSSDGSIIGETSNLLYEEDGTVSLKIHFDDGDLDDDGIEPAIREKIDRTKASSGCHINYNMNSGMRYLNEDPWILKILQTYYGSRSMVVRADLLVLPYQSLLSKSSREALGLNLKSNIDNR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01903 900 Pfam DEAD_2 859 897 IPR010614 GO:0003677|GO:0003678|GO:0005524
Aip06g01903 900 PANTHER OS02G0262500 PROTEIN 383 518 - -
Aip06g01903 900 PANTHER OS02G0262500 PROTEIN 64 381 - -
Aip06g01903 900 MobiDBLite consensus disorder prediction 1 30 - -
Aip06g01903 900 Pfam MULE transposase domain 287 380 IPR018289 -
Aip06g01903 900 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aip06g01903 900 MobiDBLite consensus disorder prediction 1 17 - -
Aip06g01903 900 Gene3D - 855 897 IPR027417 -
Aip06g01903 900 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 383 518 IPR031052 GO:0006355
Aip06g01903 900 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 381 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01903 Aip-Chr6 68348712 68354063 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g01903 MULE 1.8e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01903 - - aip:107607548 842.032