Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01900 ATGGCTGGATCAGAAACTACAAGCAGCACGATAGAGTGGGCACTCACAGAGCTTCTGTGCAACCGTAATTGCTTAATAAAGGTAAAATCCGAGCTCAATAGAGTGGTTGGAACCGCAAGGGAACTCGAAGAGAGTGACATAGAAAAGCTCCCATACCTTCAAGCTGTGGTGAAAGAAACACTTCGCTTGCACCCTCCCATTCCGTTGCTTGTTCCTCGAAGGGCCATTCAGGACACAAAGTTCATGGGATACTACATACCAAAAGACACGCAGGTCTTCGTGAATGCGTGGGCCATTGGAAGGGACCCAGATGTGTGGAAAGACCCTTTGACCTTCAAGCCTGAAAGGTTTATTTTTTGTGATGGTGGGTCAAAGGTAGATTATAAAGGTCAACACTATGAGTTCATTCCATTTGGTGCTGGGAGGAGGATGTGTGCGGGGGTCCCACTAGCCCACAGGGTCCTCCACTTGGTGTTGGGGTCATTGCTACATCGCTTTGATTGGGAGCTTGATAGCCATGTCACGCCATCAACCATGGATATGAGGGACAAATTGGGAATTACAATGAGGAAGCTTGAGCCCTTGCTTGCAGTGCCGAAGCTTGTTGCTCCATCATGA 618 0.4838 MAGSETTSSTIEWALTELLCNRNCLIKVKSELNRVVGTARELEESDIEKLPYLQAVVKETLRLHPPIPLLVPRRAIQDTKFMGYYIPKDTQVFVNAWAIGRDPDVWKDPLTFKPERFIFCDGGSKVDYKGQHYEFIPFGAGRRMCAGVPLAHRVLHLVLGSLLHRFDWELDSHVTPSTMDMRDKLGITMRKLEPLLAVPKLVAPS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01900 205 PRINTS E-class P450 group I signature 11 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS E-class P450 group I signature 54 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS E-class P450 group I signature 95 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 SUPERFAMILY Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Aip06g01900 205 Gene3D Cytochrome P450 1 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 202 - -
Aip06g01900 205 Pfam Cytochrome P450 1 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 202 - -
Aip06g01900 205 PRINTS P450 superfamily signature 2 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS P450 superfamily signature 55 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g01900 205 PRINTS P450 superfamily signature 145 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01900 Aip-Chr6 67884291 67884908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01900 1 197 Cytochrome P450 AT1G33730 52.284 5.24e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01900 K22983 - aip:107648218 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01900 06 67884291 67884908 Aip06g01900 06 67884291 67884908 ECH