Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01897 ATGATCTCAATTAACTTAGAACAATTTGATTGTTTGCCTCTTTCACCTGTACTTAGTGGTTCTACCCTGATATTTGGATGTGCACTGCTGGATTGCCTGAAGCAATTCATTGTTGCTGAGCATTTTGAGAACTATCACTGTCACTACTGTGACACAGGCAACAAAATTGGGACCTATAGAATTACCTTGTGTACCAATTTTCACAATGTACCTTTTTATGTGGCTGCACCACTGACTTCAATTGATTTGTCACTTTCTTTCGGAGAAGAAATCGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCATGA 348 0.4138 MISINLEQFDCLPLSPVLSGSTLIFGCALLDCLKQFIVAEHFENYHCHYCDTGNKIGTYRITLCTNFHNVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVAAS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01897 115 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 51 115 - -
Aip06g01897 115 SUPERFAMILY NagB/RpiA/CoA transferase-like 51 106 IPR037171 -
Aip06g01897 115 Gene3D - 51 106 IPR042529 -
Aip06g01897 115 Pfam Initiation factor 2 subunit family 52 106 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01897 Aip-Chr6 66433966 66435366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01897 51 114 Eukaryotic Initiation Factors Gene Family AT2G05830 71.875 3.82e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01897 K08963 - aip:110263737 184.496