Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01893 ATGGCAATTTTTGTTGCTGCCGTAATTGACTTTGTTTATTTTGGCGGTTCTGGTGATTACGGCGGTTTTGAACCGCCGTTTTCAACAAAATTGCTCGAATTCGACTCGGCGGTTAACATTCTCGTTAACTCGGCCGGTGTTCTTGATAGCAAGTACTCGACCATAGCCAACATTGCAGTGGAGGATTTTGATCACATTTTCAGATGCGCCTATTCTGGTTCTCTTACAAGTGGAGTAGGAATGCCAATACAAAGTGCAATTTTGGGGAAACCATCAGAATTTTCATTAATTGTATATAGAGGATTTCCTGTGTGGCTGAAGTACAATACGTTCTCCCCCGATATGGTGAACAAGATGCCTAGAACAGATCTCGTTGAGGAGATTTTTAGGCTACAAGCTGCACTGGGTGAGCAGACACAAGTTACAAAGTTTAGCCAAGAGGAGTATGAAAGGCTTCAAAATTTGGAGATGTCATCCCAGACAGCACCTTGGCCTTCTTGGACAACGATAACAAGCCACAGTCTGAGAGCAGAAGAGCTGAAAGGATGTGTTGGGAGTGAGGAGTACACACAAGATGGAACAAAAATGGAGGTTCGGATCAAGATCCTCTACACTTCAATATGTCATACCGATCTAGCATGTTGGAAAGCTAAGAATGAAGCTCAGCGCGCTTTTCCTCGGATTTTTGGCCATGAAGCTTCCGGAAAGCTGTGTTGA 717 0.4393 MAIFVAAVIDFVYFGGSGDYGGFEPPFSTKLLEFDSAVNILVNSAGVLDSKYSTIANIAVEDFDHIFRCAYSGSLTSGVGMPIQSAILGKPSEFSLIVYRGFPVWLKYNTFSPDMVNKMPRTDLVEEIFRLQAALGEQTQVTKFSQEEYERLQNLEMSSQTAPWPSWTTITSHSLRAEELKGCVGSEEYTQDGTKMEVRIKILYTSICHTDLACWKAKNEAQRAFPRIFGHEASGKLC 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01893 238 Pfam Alcohol dehydrogenase GroES-like domain 197 236 IPR013154 -
Aip06g01893 238 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 107 154 - -
Aip06g01893 238 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 107 154 - -
Aip06g01893 238 SUPERFAMILY GroES-like 195 235 IPR011032 -
Aip06g01893 238 Gene3D - 195 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01893 Aip-Chr6 64728109 64733594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01893 108 154 C3H Transcription Factor Family AT1G73950 68.000 2.25e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01893 - - ahf:112772513 318.546