Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01874 ATGGAGACAAGTTACTTACAGGATCCTGGGCAGTGTGGAAATGTATTGAAAGGATTTGAGGGATTCTTATCTTCCTCAAAGAACACTGCACTGGGTCTCATGGCTACCCCACCAGACGAAGGACAACTTATAAACATGCTGGTTAAACTCATAAACGCAAAGAAGACGATGGAAATTGGTGTCTACACTGGTTATTCTTTACTCTCTACTGCTCTTGCTCTTCCTTATGATGGAAAGTTTTTCCAGTTGAAAAGTGGTAGTGAATCGGAATATTTAGGCAGAGATGATCTATCATTTATCTTTACACTCAAGGCAGCAGACAGTGCAACACTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTTAG 369 0.4011 METSYLQDPGQCGNVLKGFEGFLSSSKNTALGLMATPPDEGQLINMLVKLINAKKTMEIGVYTGYSLLSTALALPYDGKFFQLKSGSESEYLGRDDLSFIFTLKAADSATLYGVCLHVPEIV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01874 122 Pfam Histone acetyltransferase subunit NuA4 1 28 IPR015418 GO:0000123|GO:0016573
Aip06g01874 122 Pfam O-methyltransferase 27 93 IPR002935 GO:0008171
Aip06g01874 122 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 28 93 - -
Aip06g01874 122 PANTHER O-METHYLTRANSFERASE-RELATED 28 93 - -
Aip06g01874 122 Gene3D Vaccinia Virus protein VP39 16 102 IPR029063 -
Aip06g01874 122 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 122 IPR002935 GO:0008171
Aip06g01874 122 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 80 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01874 Aip-Chr6 61582291 61586728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01874 32 93 Monolignol Biosynthesis Gene Families AT4G34050 62.903 1.57e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01874 K00588 - gmx:100799303 86.6557