Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01870 ATGGCCACCGACGCGCCGCTGCACTTCATGATTGAATTTTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCATATATGCACCAGTGGGGATACTTCCACCGTTATCTGAAGCCTGTTGTTATTGTGCAGCAAATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAATCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGTCCTGGTTTTTGTGAATCTACTTCAAGTTTCAAATGGCACTTTCAAACATGTGCTACTGACCAATTTCAATATGATAATGCCTGA 582 0.4175 MATDAPLHFMIEFSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQWGYFHRYLKPVVIVQQMEIYTMVYSDFGLAREISSQSPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGASPGFCESTSSFKWHFQTCATDQFQYDNA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01870 193 Gene3D Phosphorylase Kinase; domain 1 8 40 - -
Aip06g01870 193 Gene3D Transferase(Phosphotransferase) domain 1 41 192 - -
Aip06g01870 193 Pfam Protein kinase domain 15 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01870 193 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 14 166 - -
Aip06g01870 193 SUPERFAMILY Protein kinase-like (PK-like) 15 167 IPR011009 -
Aip06g01870 193 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01870 193 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01870 Aip-Chr6 61128541 61130114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01870 15 166 Core Cell Cycle Gene Families AT3G48750 41.290 7.21e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip06g01870 Pkinase 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01870 K08829 - gmx:100810150 270.396