Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01867 ATGGTCCTCAAGACGGAACTTTGCCGCTTTAGTGGCGCGAAGATCTACCCTGGGAAGGGCATCAGATTCGTTCGTGGTGATTCTCAGGTCTTTCTGTTTTCAAACTCGAAATGCAAAAGGTATTTCCACAATCGTTTGAAGCCATCAAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAAAAGGACATTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAAGAAGCCATACTCTAGGTCAATTGTTGGTGCTACCTTGGAAGTTATCCAGAAGAGAAGAACCGAGAAGCCTGAAGTTAGAGATGCAGCAAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAAGATGAGAAAAAGGCTATGAAGGCAGAGGTATCGGCTAAGCAACAAAAGGCACAGGGCAAAGGCCATGTTACAAAGGTTGCTGCACCGAAAGGTCCCAAACTTGGTGGAGGAGGTGGCAAACGCTGA 495 0.4646 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAMKAEVSAKQQKAQGKGHVTKVAAPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01867 164 Gene3D - 69 143 - -
Aip06g01867 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Aip06g01867 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Aip06g01867 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Aip06g01867 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Aip06g01867 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Aip06g01867 164 MobiDBLite consensus disorder prediction 121 164 - -
Aip06g01867 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Aip06g01867 164 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 164 - -
Aip06g01867 164 Coils Coil 112 139 - -
Aip06g01867 164 SMART 4TRASH 8 46 IPR011017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01867 Aip-Chr6 59548497 59550116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01867 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 6.61e-87 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01867 K02896 - gmx:100499884 262.692