Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01865 ATGGAAGCGAATGGAATAGGTAGTGTAATTTACACTAGCATAAACACTTCATTGCTAGGAATAGAGAATAACACATTACAGCAAAACCCACACAACAATTTGCATCATCATCATCCTCCTCCTCAAATGGTTTATTCTACACACCATGACACTGAATCACACCCTTCACAACAGCAACAACAACAGCAACCACAGCAAGCAATGAAACATGGATACCCTTATTCTTCCAAGAAACCACAGAGCAGCACCTTCAGTGATGAAGATGAACCTGGTGGTGGTTTCGGTGCAGATGAAAGCTCTGGTGACCCGAAGAGGAAGGCCTCGCCATGGCACAGGATGAAGTGGACCGACGCCATGGTTAGGCTTTTGATAATGGCGGTTTACTACATCGGAGACGAAGCTGGTTCAGAAGGTGTAGGAGGAGGAGGAGGCGGCGGTGGTGATCCAAGTGGGAAGAAGAAGAACACCGGATTGCTTCAGAAAAAAGGGAAATGGAAATCAGTGTCGAGGGCTATGATGGAGAAAGGGTTCTACGTTTCTCCTCAGCAATGTGAAGATAAATTCAATGATTTGAACAAGAGGTACAAGAGGGTCAACGATATTCTTGGAAAAGGAACAGCTTGTAGGGTGGTTGAGAATCAGAGCTTTTTGGAAACCATGGATTTGTCGCCAAAGATGAAAGAAGAGGTGAGGAAGCTTCTCAATTCTAAGCACCTTTTCTTTAGGGAAATGTGTGCTTACCATAACAGTTGCGGCCACGGCGGTGGTGCTGCTGCTGTTACTGCCGCCGGCGGTAACGGGCAACACTCGGCTGAGGCGGGAACAGAACAACCTTTACATATTCAACAACCGCAACCGCCACAGCATCAGCAGGGACAGCAGAGATGCTTCCATTCATCGGTGAATGGGGTTGGGATGCTGAAAGAGGACGATGATGACGAGGAGGACGATGAATCTGACGATTTCTCTGACGAGGATGAAGAGGAATCAGGAGAAGGTGGTGGCTCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTAGTGAGGTCAAGGAAGAGACACAGGAACAAGGGAGGGTTCTGTGTGACATCATCATCAACATCAGCGTCTCAATTGATGCAGCAGTTGAACAACGAGGTTGCTGGGGTTCTGCAAGACGGAGGAAAGAATCCATGGGAGAAGAAGCAGTGGATGAAGAAGAGGGTGCTCCAGCTGGAGGAGCAGCAGGTGAGGTACCATGTGGAGGCCTTTGAGCTTGAGAAGCAGAGGCTCAAGTGGGTCCGGTTCAGTTCCAAGAAGGAGAGGGACATGGAGAGGGACAAGCTGGAGAATGAGAGGAGGAGGCTAGAGAATGAGAGGTTGCTCTTGCTTCTTCGCCAAAAGGAGCTTGAATTCACTGCTCTTCATCACCTCAAGCACCAGCAACAGCAGCAACATTCTTCTACCTAG 1449 0.4845 MEANGIGSVIYTSINTSLLGIENNTLQQNPHNNLHHHHPPPQMVYSTHHDTESHPSQQQQQQQPQQAMKHGYPYSSKKPQSSTFSDEDEPGGGFGADESSGDPKRKASPWHRMKWTDAMVRLLIMAVYYIGDEAGSEGVGGGGGGGGDPSGKKKNTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSFLETMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHGGGAAAVTAAGGNGQHSAEAGTEQPLHIQQPQPPQHQQGQQRCFHSSVNGVGMLKEDDDDEEDDESDDFSDEDEEESGEGGGSRGQVEDDENDVVRSRKRHRNKGGFCVTSSSTSASQLMQQLNNEVAGVLQDGGKNPWEKKQWMKKRVLQLEEQQVRYHVEAFELEKQRLKWVRFSSKKERDMERDKLENERRRLENERLLLLLRQKELEFTALHHLKHQQQQQHSST 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01865 482 MobiDBLite consensus disorder prediction 262 366 - -
Aip06g01865 482 MobiDBLite consensus disorder prediction 332 351 - -
Aip06g01865 482 Gene3D - 115 197 - -
Aip06g01865 482 Coils Coil 432 459 - -
Aip06g01865 482 MobiDBLite consensus disorder prediction 308 331 - -
Aip06g01865 482 MobiDBLite consensus disorder prediction 25 108 - -
Aip06g01865 482 MobiDBLite consensus disorder prediction 268 300 - -
Aip06g01865 482 PANTHER F16F4.11 PROTEIN-RELATED 1 482 - -
Aip06g01865 482 MobiDBLite consensus disorder prediction 139 161 - -
Aip06g01865 482 Pfam Myb/SANT-like DNA-binding domain 112 246 IPR044822 -
Aip06g01865 482 MobiDBLite consensus disorder prediction 46 87 - -
Aip06g01865 482 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01865 Aip-Chr6 59404577 59406775 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip06g01865 Myb_DNA-bind_4 3.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01865 - - aprc:113863792 493.426