Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01828 ATGGCGCCGCCACCCCCGCAGGCCTCATCGACCTTCGGCGCCTTCGTCGGCGGCAACATCACCTTCCTCCGCGGCATCGTCTACGTCATCGCCCAGCTCCTTGGCTCCATCGTCGCTGCCTTGCTCCTCAAGTTCGTCACCGCAAGCACTGTTCCAGCATTTGCACTCTCATCAGGAGTAGGTGTTGGTGAGGCTTTGGTGTTGGAAATTGTGTTGACTTTCGGTTTGGTGTACACTGTGTACGCTACCGCTGTTGACCCCAAGAAGGGTAGTTTGGGAACTATTGCACCAATCGCAATTGGTTTCATCGTTGGTGCCAACATCCTTGTAGGTGGGGCTTTCGACGGTGCATCGATGAATCCTGCCGTTTCCTTCGGACCCGCCGTCGTGAGCTGGAGCTGGAGCAACCACTGGATCTACTGGGTGGGCCCACTCATCGGTGGTGGTATTGCCGGAGTCATCTACGAGGTTCTCTTCATCAGCCACACCCATGAGCAGCTCCCAACCACTGACTACTAG 519 0.5665 MAPPPPQASSTFGAFVGGNITFLRGIVYVIAQLLGSIVAALLLKFVTASTVPAFALSSGVGVGEALVLEIVLTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLIGGGIAGVIYEVLFISHTHEQLPTTDY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01828 172 PANTHER AQUAPORIN TIP1-1 10 172 - -
Aip06g01828 172 PANTHER AQUAPORIN-8 10 172 IPR034294 -
Aip06g01828 172 Pfam Major intrinsic protein 11 155 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01828 172 Gene3D Glycerol uptake facilitator protein. 8 172 IPR023271 -
Aip06g01828 172 SUPERFAMILY Aquaporin-like 11 168 IPR023271 -
Aip06g01828 172 PRINTS Major intrinsic protein family signature 68 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01828 172 PRINTS Major intrinsic protein family signature 138 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01828 172 PRINTS Major intrinsic protein family signature 101 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01828 172 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01828 Aip-Chr6 50109512 50110901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01828 11 172 Major Intrinsic Protein MIP AT2G36830 79.755 1.73e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01828 K09873 - gmx:100527509 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01828 06 50109512 50110901 Aip06g01828 06 50109512 50110901 ECH