Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01799 ATGATATGGCGTTCTCTACTTCTCGCAATATGCGACCGTCTGACAAAGGCTAGGAAGAGGAGCTCTGAAGAGGAGCTCCTCGCAGACATTCTGGATTCTCCCGAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATATTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGTAGGTAAAGTGGCTGCTAATCTCGAAAGCCCCAGGTCGAGAATTTACAGGAATTCACCTGTTGAAGCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGGTCAAGGATCGATAATTCTGCTATTGGGCAGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGTTAAGACAAGGGTTGGTTGCAAGGCAATGATAATGGGTGAACGGTATAGAATTCGGGAATTAAATCAGCAGTTGACGTACAGCAGAGAAAAAGAGCATTACCATAATATGAGCATGGAGAAGGAGGAGGAGGAGGAGCCTGTTGCTGCGGCTGTTGTTGTGGTGGATAACGCTGTTGATGATGATAGTAACTGTATTGATAAGGTAGTTGTTGTGGTCTACCATAACCCATTGGAGGAGGAACACATTCATTGTGGTTGTTGTGGTTGA 750 0.4427 MIWRSLLLAICDRLTKARKRSSEEELLADILDSPELTRSCSNLERRDILGNTIHQFPDSKSQSFENLQELTVGKVAANLESPRSRIYRNSPVEAYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGQIFVCNKEGYRMTDKRENVIRQRVKTRVGCKAMIMGERYRIRELNQQLTYSREKEHYHNMSMEKEEEEEPVAAAVVVVDNAVDDDSNCIDKVVVVVYHNPLEEEHIHCGCCG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01799 249 Pfam FAR1 DNA-binding domain 109 197 IPR004330 -
Aip06g01799 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 78 203 - -
Aip06g01799 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 78 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01799 Aip-Chr6 45597650 45600714 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g01799 FAR1 5.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01799 - - aip:107647603 264.233