Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01785 ATGTATGGTAGCAACAAGCGCTGCGCTGTCCTGAGAATTGAGATAGATGGTGGCCCCATTGAAGGGTTGAATGCTCCCAGCTACTACAATGACCGAGTCAATGACCTGGTTGCCTCCCTCCTTGGCATGCAAATAGTTCTTTCTACAGTTTGTGTTTCGGATCTAATAATTACAACCCAGGAAGAATCTTGGGTCCCATTAAATAAGCCAACCCAAGTTTCGAAGGACAAACAAGTTCCCACTTCCGCGCTCTACACTCATCCCTCTAAATGCTCCATCGGCGGCGCTATCAGCCTTGCACCGCCGTCGTACCGAACCTCCATTACACTGAACTTCCATTGCACCGAGGCTCTGTCGCACCCCTTACCTGTTCTTCTCTATCGCACCCCCTCCGTCGGCCTTGCTCGCGTTGCTCCCTTACGAACCCTAATGTGCGTGTCTCTCTTTGATCTCGCCACTAGTGCTTGCTCTTCTCCGTGTGTTGCTGCGTTTCTCTCTTCGATCTTGCCTCAGCTGTGCAGGACTGAGAATCAAGATGATATAGATGCCGTAATTGTTGGTGTGCTTGTTGATCCAAAGGAGGCAAGAGCTGGAATCAGGGAGGTCCATTTTTTCCCTTTCAATCCTGGAGACAAGAGGACTGCTCTAACTTACATTGAATCTGATGGAAATTGGCATATATCCAGCAAAGGTGCTCCAGAGCAGATATTGAACCTCTGCAACTACAAAGAGGATACAGCTTCGGAAGTACCTGAGAAATCAAAAGATGCTCATGGTGCACTATGGCAATTTCTTGCGCTGCTACCACTATTTGATCCTCCCAGGCATGATAGCACTGAAACCATCACAAGAGACCTGAACCTTGGTGTTAATGTGATCAGCTTGCTATTGCCAAGGAAACTGGAAGAAGGCTTGGCATGGGAACAAACTTGTACCCTTCATCCTCATTGCTTGAAATTACCACAAGAGTTTGGTTCAAACAGCAACAATGCAATATCTGCATATTGTTCTAGAAGTCGTGCATGGCTTTCTATTAAAAGATACCAGCCTCCTCTTCCAGCTGATCAAGTAAAATCTTTAAATGAATATGATGAGGAAGGAGAAGCCTCACGAAGGGTGCGAGGAAGAGGACATGGTGGAAGGGGGAGGGGAAGAGGAAGGGGAAATTACGATGGAGGTAATGATCGCACAAAGGGGTAA 1200 0.4725 MYGSNKRCAVLRIEIDGGPIEGLNAPSYYNDRVNDLVASLLGMQIVLSTVCVSDLIITTQEESWVPLNKPTQVSKDKQVPTSALYTHPSKCSIGGAISLAPPSYRTSITLNFHCTEALSHPLPVLLYRTPSVGLARVAPLRTLMCVSLFDLATSACSSPCVAAFLSSILPQLCRTENQDDIDAVIVGVLVDPKEARAGIREVHFFPFNPGDKRTALTYIESDGNWHISSKGAPEQILNLCNYKEDTASEVPEKSKDAHGALWQFLALLPLFDPPRHDSTETITRDLNLGVNVISLLLPRKLEEGLAWEQTCTLHPHCLKLPQEFGSNSNNAISAYCSRSRAWLSIKRYQPPLPADQVKSLNEYDEEGEASRRVRGRGHGGRGRGRGRGNYDGGNDRTKG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01785 399 MobiDBLite consensus disorder prediction 384 399 - -
Aip06g01785 399 MobiDBLite consensus disorder prediction 358 399 - -
Aip06g01785 399 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 183 276 IPR023299 GO:0000166
Aip06g01785 399 MobiDBLite consensus disorder prediction 359 375 - -
Aip06g01785 399 Gene3D - 173 271 IPR023299 GO:0000166
Aip06g01785 399 PANTHER CALCIUM-TRANSPORTING ATPASE 248 293 - -
Aip06g01785 399 PANTHER CALCIUM-TRANSPORTING ATPASE 173 246 - -
Aip06g01785 399 Gene3D - 272 292 IPR023214 -
Aip06g01785 399 PANTHER PLASMA MEMBRANE ATPASE 248 293 - -
Aip06g01785 399 PANTHER PLASMA MEMBRANE ATPASE 173 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01785 Aip-Chr6 44921839 44934883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01785 174 292 Primary Pumps ATPases AT2G24520 65.957 1.08e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01785 K01535 K14618 ahf:112754217 212.616