Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01769 ATGTCACAAGATTCTTGTTTGGAGGCAGCAAATACAACACTCGAGCAGTGGAAATGGACCGAAATGCAAGGCCTTGAGCTTCTTCCTGATGCTACCATTTCCCACCATTATAATAATAAACCCAACAACACAAAACTCCTCACACACCAAATGGAAACTACTACTACTACTACTACTGAACCAAACAAAGATGATGATGCTCCTTCCTCTGCTACTTCTTCTGGTAATGGTAGTAGTGACAGCAACAAGAACAACAAGAAGAATGAGAGTGTTCCCTCTGTTGGGTTCAGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTATGTTCTAATGTCCATTGGAAGCGTTGGAGCAATCGTGCACGGTTGTTCCTTGCCACTCTTCCTTCGCTTCTTCGCTGATCTTGTCAACTCTTTTGGTTCCAATGCCAACAACTTGGACAAGATGACTCAGGAAGTCGTCAAGTATGCATTTTACTTTCTGGTAGTTGGTGCTGCTATATGGGCATCTTCATGGGCAGAGATATCTTGTTGGATGTGGAGTGGGGAGAGGCAATCAACAAGGATGAGGATCAAGTACCTTGAAGCTGCTCTCAGCCAAGACATTCAGTTTTTCGACACGGATGTTCGAACCTCCGATGTTGTAATTGCCATCAACACTGATGCCGTCATGGTCCAAGATGCCATCAGCGAGAAGTTGGGAAACTTCATTCACTACATGGCCACATTTGTGTCTGGTTTTGTTGTTGGTTTCACTGCAGTCTGGCAATTGGCACTTGTGACCCTTGCCGTGGTCCCTATGATCGCAGTCATTGGCGCCATTCACACCACCACATTGGCCAAGCTCTCTGGCAAAACCCAGCAAGCTCTTTCTGAAGCTGGCAACATTGTGGAACAGACAGTTGTGCAAATTCGAGTGGTGCTGGCCTTCGTGGGGGAGTCTCGAGCATTGCAGGCATACTCTTCGGCATTGAAGGTTGCCCAGAAGCTTGGCTACAAAACTGGTTTTGCAAAGGGAATGGGATTGGGTGCCACTTACTTTGTTGTTTTCTGTTGTTATGCACTTCTTCTTTGGTATGGAGGCTATCTGGTTCGCCACCACGCCACCAATGGAGGGCTTGCCATTGCCACCATGTTTGCTGTTATGATTGGTGGAATAGGTCTAGGCCAGTCTGCGCCGAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGCATAATCGATCACAAACCACGGATAGATAAGAACAGTGAATCTGGTTTGGAGCTTGAGACAGTAACTGGACTTCTAGAGCTAAAGAATGTGAACTTTTCATACCCGTCAAGGCCAGATGTTCCGATCCTCAACGACTTCTCGTTGAGTGTGCCTGCTGGCAAGACAATAGCCTTGGTAGGTAGCAGTGGCTCTGGAAAGAGCACTGTGGTTTCCCTCATTGAAAGATTTTATGACCCAACTTCAGGACAAGTTTTTCTGGATGGCCATGACATTAAAACATTGAAGCTTAGATGGTTGAGGCAGCAGATAGGGCTAGTGAGCCAAGAGCCTGCGTTGTTCGCAACCACGATTAGAGAAAATATACTATTGGGAAGGCCTGATGCTGACCAGGGTGAGATCGAAGAAGCGGCCAGGGTAGCTAATGCTCATTCCTTCATCATCAAACTTTCTGAAGGTTACGAAACCCAGGTTGGAGAGAGAGGGATGCAACTCTCAGGAGGACAAAAACAGAGAATAGCAATTGCAAGGGCTATGCTTAAAAACCCAGCAATTCTCCTCCTTGATGAGGCAACAAGTGCATTGGATTCTGAATCAGAGAAACTGGTGCAAGAAGCCCTGGACCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCGCATCGCCTCTCGACTATACGCAAAGCCGACCTTGTAGCTGTACTTCAGCAAGGAAATGTGTCTGAAATTGGAACTCATGATGAGCTCTTTTCCAAAGGAGAAAATGGAGTCTATGCAAAGCTCATAAAGATGCAAGAAATGGCTCATGAAACTGCCATGAACAATGCCAGAAAGAGTAGTGCACGGCCTTCAAGTGCAAGAAACTCGGTAAGCTCACCCATAATTGCTCGGAATTCTTCTTACGGCCGCTCACCATACTCTCGAAGGCTGTCTGATTTCTCCACATCAGATTTTAGTCTGTCGCTGGATGCATCACATCCGAATTACAGGCTCGAAAAGCTTGCCTTCAAAGAGCAAGCAAGTTCCTTCTGGCGACTAGCGAAGATGAACTCTCCTGAGTGGCTATACGCTTTGATTGGCTCTATAGGCTCCATTGTTTGTGGATCACTTAGTGCTTTTTTCGCATATGTTCTCAGTGCTGTCCTCAGTGTGTATTACCATCCGAATCACAAGCACATGATCACACAAATTGATAAGTACTGCTACTTGTTGATTGGCCTTTCATCAGCTGCACTTATCTTCAACACATTGCAACATTCCTTCTGGGATATTGTTGGTGAAAATCTAACAAAACGAGTGAGGGAGAAAATGCTGACGGCAGTGCTAAAAAATGAGATGGCTTGGTTTGATCAGGAGGAAAACGAGAGTGCACGGATCGCTGCTAGGCTTGCTCTTGATGCCAACAATGTTAGATCAGCCATTGGAGATCGAATTTCGGTGATAGTTCAGAACACTGCGCTCATGCTAGTTGCGTGTACTGCAGGGTTCGTCCTGCAGTGGCGTCTTGCCCTTGTCCTCATCGCCGTCTTTCCTCTTGTTGTTGCGGCCACTGTGTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGATCTGGAAGCTTCTCATGGCAAGGCCACACAGTTAGCTGGAGAAGCTATAGCCAATGTAAGAACTGTTGCAGCCTTCAATTCAGAAACCAAAATTGTTGGGCTTTTCGCTTCGAACCTCGAAATTCCACTACAACGGTGCTTTTGGAAAGGACAAATTTCTGGAAGCGGATATGGGATAGCACAGTTTGCTCTTTATGCTTCCTATGCACTTGGTCTCTGGTATGCTTCTTGGCTTGTGAAGCACGGAATCTCTGATTTCTCCAAAACCATCCGAGTGTTCATGGTCCTCATGGTCTCTGCTAATGGAGCTGCCGAAACTTTGACATTGGCTCCTGATTTCATCAAGGGAGGCCGAGCTATGAGGTCAGTCTTTGATCTCCTTGACCGGAGAACCGAAATTGAGCCGGATGATCCAGATGCCACCCCTGTTCCTGATCGTCTTCGAGGCGAAGTTGAACTTAAGCATGTGGACTTCTCTTACCCAACGCGGCCCGATATGGCTGTTTTTCGCGACCTCAGCCTTCGTGCCAGGGCGGGTAAAACTCTGGCCCTTGTGGGACCTAGTGGCTGCGGCAAGAGCTCAGTCCTTGCACTTATACAGAGATTCTATGATCCATGTTCTGGTAGAGTCATGATTGATGGAAAGGACATAAGGAGATACAATCTCAAGTCTCTAAGAAGACACATTGCTGTGGTACCTCAGGAGCCATGCTTGTTTGCGACAAGTATTTATGAAAACATTGCCTATGGACATGACGCGGCCTCTGAAGCCGAGATAGTGGAGGCTGCGACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTTCCAGATGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAACTTTCTGGGGGACAAAAGCAAAGAATAGCAGTTGCTCGGGCTTTTGTGAGGAAGGCTGAGCTTATGCTTCTTGACGAAGCAACTAGTGCGCTCGACGCTGAATCCGAGAGGTCGGTTCAGGAGGCTCTAGACCGTGCCTGCTCGGGGAAAACAACCATCGTTGTTGCACACAGGCTATCAACCATCAGAAATGCCAACCTGATTGCTGTGATTGATGATGGCAAAGTAGCTGAACAAGGCTCGCATTCGCACTTGTTGAAGAATCATCCTGATGGGGTTTATGCGCGCATGATTCAATTACAAAGATTCACACATACCCAAGTCATTGAGATGGCGTCCGGTTCAACTTCTTCAACGAGGCCAAAAGATGTCGAAAGACAAGGTTAG 4071 0.4677 MSQDSCLEAANTTLEQWKWTEMQGLELLPDATISHHYNNKPNNTKLLTHQMETTTTTTTEPNKDDDAPSSATSSGNGSSDSNKNNKKNESVPSVGFSELFRFADGLDYVLMSIGSVGAIVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTRMRIKYLEAALSQDIQFFDTDVRTSDVVIAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKTQQALSEAGNIVEQTVVQIRVVLAFVGESRALQAYSSALKVAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHATNGGLAIATMFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHKPRIDKNSESGLELETVTGLLELKNVNFSYPSRPDVPILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVFLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQGEIEEAARVANAHSFIIKLSEGYETQVGERGMQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGNVSEIGTHDELFSKGENGVYAKLIKMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYHPNHKHMITQIDKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPLVVAATVLQKMFMTGFSGDLEASHGKATQLAGEAIANVRTVAAFNSETKIVGLFASNLEIPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATPVPDRLRGEVELKHVDFSYPTRPDMAVFRDLSLRARAGKTLALVGPSGCGKSSVLALIQRFYDPCSGRVMIDGKDIRRYNLKSLRRHIAVVPQEPCLFATSIYENIAYGHDAASEAEIVEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAVARAFVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNANLIAVIDDGKVAEQGSHSHLLKNHPDGVYARMIQLQRFTHTQVIEMASGSTSSTRPKDVERQG 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01769 1356 CDD ABC_6TM_Pgp_ABCB1_D2_like 756 1072 - -
Aip06g01769 1356 ProSitePatterns ABC transporters family signature. 574 588 IPR017871 GO:0005524
Aip06g01769 1356 SUPERFAMILY ABC transporter transmembrane region 754 1077 IPR036640 GO:0005524|GO:0016021
Aip06g01769 1356 Pfam ABC transporter 453 602 IPR003439 GO:0005524
Aip06g01769 1356 Pfam ABC transporter 1109 1257 IPR003439 GO:0005524
Aip06g01769 1356 ProSitePatterns ABC transporters family signature. 1229 1243 IPR017871 GO:0005524
Aip06g01769 1356 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 767 1054 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01769 1356 SUPERFAMILY ABC transporter transmembrane region 98 419 IPR036640 GO:0005524|GO:0016021
Aip06g01769 1356 MobiDBLite consensus disorder prediction 53 90 - -
Aip06g01769 1356 Pfam ABC transporter transmembrane region 768 1037 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01769 1356 Pfam ABC transporter transmembrane region 113 384 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01769 1356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 435 671 IPR003439 GO:0005524
Aip06g01769 1356 CDD ABC_6TM_Pgp_ABCB1_D1_like 111 408 - -
Aip06g01769 1356 SMART AAA_5 1117 1309 IPR003593 -
Aip06g01769 1356 SMART AAA_5 462 648 IPR003593 -
Aip06g01769 1356 Gene3D ABC transporter type 1, transmembrane domain 158 1063 IPR036640 GO:0005524|GO:0016021
Aip06g01769 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1081 1329 IPR027417 -
Aip06g01769 1356 CDD ABC_MTABC3_MDL1_MDL2 436 674 - -
Aip06g01769 1356 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 111 1333 IPR039421 -
Aip06g01769 1356 CDD ABC_MTABC3_MDL1_MDL2 1090 1329 - -
Aip06g01769 1356 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1090 1326 IPR003439 GO:0005524
Aip06g01769 1356 Gene3D - 1081 1337 IPR027417 -
Aip06g01769 1356 Gene3D - 433 698 IPR027417 -
Aip06g01769 1356 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 400 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01769 1356 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 111 1333 - -
Aip06g01769 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 426 674 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01769 Aip-Chr6 43520082 43525657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01769 87 1351 Calmodulin-binding Proteins AT2G36910 88.310 0.0 2306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01769 K05658 - gmx:100814667 2308.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01769 06 43520082 43525657 Aip06g01769 06 43520082 43525657 ECH