Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01763 ATGGCCATGGCCGAGGCCAAGGCTGAGGCCGAGGCCGAAAGGGGAGGCCTAGGCTTTCTACCGGTCACCCCCTTGACTTGCATGCGGATCCATACACTCTTGTTGGGTCATCATCAGGCACGACTGCTCCGACCAATGGGAGACCGCCACCTATTGCTACTACTACTCCCTCTCAGTGATCCAGCTATTGTAGCTCCCAGTCGAGCAGGATCTTGTGGGAAAAGACAAACGACATCTAATGGTACCCAAGATACTCAGTGTCAAGGAACTTTCGCTGCTACTGGTAACTCTAGCACAAGTGCTCCCAAGCTTAGATATGATGGTATCAAATGTTGGCACCCACCTAAGCCTGGCTTGAAGCGTATTTCTCATGTTTTTAAGAAAAACTACAACAAGCCTTGGCTGAGTTTTGATGAGGCAGATGATGATACTCGAAAAATATGGTGGACAGAGTGGAGGAAATTCTTTGACATTCTTGACACGGAAGAGGATGATATCTATCAAGTTTGGAGGTTTAGGGCTGCCATTTGCAAAAAAGGTGCCCGTCCATATTGGATTCCACCAGAAGTTCTTGGTGAATTGATGAGACGTTGGGACACTAATGTCTATAGACAATTACAGGCGAGAAATACAGCTGTCAGAAAATTGACTCGAGGTACCTCCCTTCACATTGTAGGAGGCACCACCTTTCCAGAAGCAAGGTTACGCTTGCTCACCATCGTCGCCCCCCACTCACTCTCTTCACTCTCACCATTGACCTTCTCACTCTCGGTCTCGCCATTGACCCTCTCACTCTCGCCATTGACCCTCTCATTACAAGCGGAAACCCTCTCACTCTCGCTATTGAGAGTCGTCGCCTCCCACTCACGACTCACCTGCACAACTCTCCATGTTGACCGTCGTCACTCCTCTTCGCCATCGCTTGCACTAATCGTCGCTGTGCCGCCTCACCATCGTCGTTGTGCGGCCTTCACCATCGTCGCTGCGCCGCTCTCACCATCGTCATCTCCGTGCTTCTCATCATCGTCTTCGCTAAATAGAAATGGTGTGAAGAATGTAAAGAATGAAAAGAAGACAAGGAGTAGAGAAGAAGTAGAAGAGGAAGAAGAAAGCAGCAACAACAATTACCAGCCACAATCTCAGACTCTAAGCAGAAGATCAGATGATGGTTACAATTGGAGAAAATATGGTCAGAAACAAGTGAAAGGTAGTGAGAATCCAAGAAGTTACTATAAATGCACATTCCCGAATTGCCCAACAAAGAAGAAAGTTGAGAGATCCTTGGATGGACAAATCACAGAGATTGTTTATAAGGGTACTCATAATCACCCTAAGCCTCAGAATACTAGGAGAAACTCTTTATCTTCTTCTAATTCTGCTGCTTTTGCAATTGCTCCCTCCAATCAAATGAACAACTCTGAGGTGACTGATCATCAATCTTATACACATGGTAGTGGACAAATGGATTCTATTGCCACCCCTGAGAACTCCTCAATTTCAGTTGGGGATGATGATTTTGAACAAAGCTCTCAGAGGTGTAAATTAGGTGGAGATGATTATGATGATGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGGGAAAATGAGAGAATATCAGGAGGTGGAAGTAGAACAGTGAGAGAAGCAAGGGTTGTGGTTCAGACAACAAGTGACATAGATATCCTTGATGATGGCTACAGATGGAGGAAGTATGGCCAGAAAGTATTATGGGCAATCCAAATCCAAGATCTCAAGGATGTGAAGTATTGGAGTTGGCACAATGAGGTTGTTGGAGTTTGGGTGCCTGGTTGCAGTTCTATGTGGTATTCTTATATCGAGTCTCCATTTGGAACTGGAAACACTGCCAATGCTGCTCTACTCTCTGCTCGCCCAGTCTTCATCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAAATGTTAGGTGCTCTATTTGA 1962 0.4562 MAMAEAKAEAEAERGGLGFLPVTPLTCMRIHTLLLGHHQARLLRPMGDRHLLLLLLPLSDPAIVAPSRAGSCGKRQTTSNGTQDTQCQGTFAATGNSSTSAPKLRYDGIKCWHPPKPGLKRISHVFKKNYNKPWLSFDEADDDTRKIWWTEWRKFFDILDTEEDDIYQVWRFRAAICKKGARPYWIPPEVLGELMRRWDTNVYRQLQARNTAVRKLTRGTSLHIVGGTTFPEARLRLLTIVAPHSLSSLSPLTFSLSVSPLTLSLSPLTLSLQAETLSLSLLRVVASHSRLTCTTLHVDRRHSSSPSLALIVAVPPHHRRCAAFTIVAAPLSPSSSPCFSSSSSLNRNGVKNVKNEKKTRSREEVEEEEESSNNNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSLSSSNSAAFAIAPSNQMNNSEVTDHQSYTHGSGQMDSIATPENSSISVGDDDFEQSSQRCKLGGDDYDDDEPDAKRWKIEGENERISGGGSRTVREARVVVQTTSDIDILDDGYRWRKYGQKVLWAIQIQDLKDVKYWSWHNEVVGVWVPGCSSMWYSYIESPFGTGNTANAALLSARPVFIKNLLQYMFNSVANVRCSI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01763 653 MobiDBLite consensus disorder prediction 372 387 - -
Aip06g01763 653 MobiDBLite consensus disorder prediction 507 526 - -
Aip06g01763 653 MobiDBLite consensus disorder prediction 437 526 - -
Aip06g01763 653 MobiDBLite consensus disorder prediction 332 350 - -
Aip06g01763 653 Gene3D WRKY domain 550 583 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 259 577 - -
Aip06g01763 653 ProSiteProfiles WRKY domain profile. 558 577 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 MobiDBLite consensus disorder prediction 442 506 - -
Aip06g01763 653 Pfam WRKY DNA -binding domain 388 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 Coils Coil 351 375 - -
Aip06g01763 653 Gene3D WRKY domain 371 447 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 SUPERFAMILY WRKY DNA-binding domain 555 578 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 SMART WRKY_cls 387 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 MobiDBLite consensus disorder prediction 351 367 - -
Aip06g01763 653 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 259 577 IPR044810 GO:0003700
Aip06g01763 653 SUPERFAMILY WRKY DNA-binding domain 386 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip06g01763 653 MobiDBLite consensus disorder prediction 332 392 - -
Aip06g01763 653 ProSiteProfiles WRKY domain profile. 388 446 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01763 Aip-Chr6 42111321 42118111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01763 358 577 WRKY Transcription Factor Family AT2G38470 56.838 2.74e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip06g01763 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01763 K13424 - aip:107621821 405.601