Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01754 ATGCGCCCTGTCACCAAACCCGAAAAGAAGATCTGTGCTCTGCTCCAGGGACTGCTCCGGCGACGATCTTCTCAGTGGCGTTATCCTCCGACGAGATTGTGTGCTCTCTCCAGCGATAATCTCCTCTGGCAGGTTCTCCTCCGTCGGCGCATTCTCCTCCTGCTACAATCTCCGTGTGAGAGCAAGCGGCGATCTCCTCCGGCGGTGATCTCCTCCATCAACGCTTCTCCATCTCTATCGAGCTTCGTTGAGCATCTAGGGGATGGAAACTCATACGGAGTCTCAAAAGCACTGAGTTGGTTGGTGCTACCTGAATTGGAGGCAAGAGTGTCTGAGAAGAATGTCCTCATTCAGATCCACTGCGAAAAACATAAAGGAGTGTTGATGCACATTCTCAAGCTCATTGACAAACTCTATCTCTCTGTTCTTAACACCACTTCCTTGACTTTTGGAACCTCCATTGTCAACATAACCATCACTTCCAAGATGGATGACAAGTTCAGCTTTAGCGTGAAGCAGCTTGCTAAAAACATAAGGGTGGGACTGTTGCAATTGATGTAG 561 0.492 MRPVTKPEKKICALLQGLLRRRSSQWRYPPTRLCALSSDNLLWQVLLRRRILLLLQSPCESKRRSPPAVISSINASPSLSSFVEHLGDGNSYGVSKALSWLVLPELEARVSEKNVLIQIHCEKHKGVLMHILKLIDKLYLSVLNTTSLTFGTSIVNITITSKMDDKFSFSVKQLAKNIRVGLLQLM 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01754 186 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 85 183 - -
Aip06g01754 186 PANTHER BHLH TRANSCRIPTION FACTOR 85 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01754 Aip-Chr6 41149999 41151166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01754 102 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 48.193 4.03e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01754 - - ahf:112748090 156.377