Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01753 ATGATGAGTTCAACCACCAAGGAGGAGTACGATGATGCTTTCACCAAAGCTGCTTCGTTCGCATTTGCTCAGGTGTTTCCTGCAATCTTGAATGCTGCTATTGATATGAACTTGTTTGAGATCATATCAAAGGCAGAGAGTTCGTTAGGCATGTCAGCTTCTGAGATTGCATCTAAGCTTCCAAAGCAACACAGTGAGATGGGTAGCAGACTTGAACGCATTCTGCCATCATTGGTGGCTCGTTCTCTTCTGACTTGCTCCATTCGTACCATTAATGAAGACGATGACACTGAAAGAGTTTATGCAGTTTCATACTATTACAAAAGAGAATCAAACAAAATATTCATGATGGAAAGAGGGAAAAAAACTGCAAGGGCAAGTTAA 384 0.4115 MMSSTTKEEYDDAFTKAASFAFAQVFPAILNAAIDMNLFEIISKAESSLGMSASEIASKLPKQHSEMGSRLERILPSLVARSLLTCSIRTINEDDDTERVYAVSYYYKRESNKIFMMERGKKTARAS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01753 127 PANTHER O-METHYLTRANSFERASE 16 104 IPR016461 GO:0008168
Aip06g01753 127 Pfam Dimerisation domain 29 78 IPR012967 GO:0046983
Aip06g01753 127 Gene3D - 1 108 IPR036388 -
Aip06g01753 127 SUPERFAMILY "Winged helix" DNA-binding domain 8 104 IPR036390 -
Aip06g01753 127 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 16 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01753 Aip-Chr6 41068604 41068987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01753 11 108 Monolignol Biosynthesis Gene Families AT5G54160 40.816 1.07e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01753 - - lja:Lj0g3v0124669.1 108.227