Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01749 ATGAACCTTTTCTTCTCTAGACACATGGCTAAAAGAAGAAGTATTAGTAGTAGAGGAGGATTATTATGGAGGAAGGGAAAGGGAGGGTTGTTACCAATGATGAAGAAATTGTTGTTCTCATCATCGTCACGTGATGATGAGAAAGGAGTGAAAGAGGGGCATTTTGTGGTGATTGCAACACAAGGTTGGAAGGAAGAGAGGTTCTTCATTGAATTGGGGCATTTGGATAACCCTGACTTTGTTCAACTCTTAAAGCAAGCTGAAGAGGAGTACGGTTTCTCTCAGGAGGGCGCACTTGCTATTCCTTGTGACCCTCTTTATTTGAAGACAATCATTTCCACCAAAAATTAA 351 0.4103 MNLFFSRHMAKRRSISSRGGLLWRKGKGGLLPMMKKLLFSSSSRDDEKGVKEGHFVVIATQGWKEERFFIELGHLDNPDFVQLLKQAEEEYGFSQEGALAIPCDPLYLKTIISTKN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01749 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 115 IPR003676 GO:0009733
Aip06g01749 116 PANTHER SMALL AUXIN-UP RNA-RELATED 30 115 - -
Aip06g01749 116 Pfam Auxin responsive protein 36 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01749 Aip-Chr6 40768099 40768507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01749 35 113 Calmodulin-binding Proteins AT4G34750 41.772 1.28e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01749 - K14488 lja:Lj5g3v0657010.1 119.398