Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01744 ATGAAAATTGCTGATTTCGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACATCTATAGCCAGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGACAGATGTATATAGTATTGGAGTTGCACATCGTTCAAATGCCTTAGGTGATGAGTCTAAATTTCTTCCTCTTTGGAGACAGCTAACTAACAGCTGCCATAAACAGGAAGAAAACAAAATCCTAGAGAAAACACACCGCCAAAAGATTTTGGATGTTGAAAAGCTTAGCCAAACCATTCAAGAACTCGAGGAAACCATCTTAGCAAGCGGAGCCACTACTAATGCCATTCGTGATTACCAACAGTGGATTTCTGAGCTGCTAGTAGGCATATCTTGA 405 0.4148 MKIADFGLARSFQEDKSHISTSIARTLGYMAPEYLAHGQLTEKTDVYSIGVAHRSNALGDESKFLPLWRQLTNSCHKQEENKILEKTHRQKILDVEKLSQTIQELEETILASGATTNAIRDYQQWISELLVGIS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01744 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01744 134 Pfam Microtubule-associated protein 70 77 129 IPR009768 GO:0007010|GO:0008017
Aip06g01744 134 SUPERFAMILY Protein kinase-like (PK-like) 2 52 IPR011009 -
Aip06g01744 134 Coils Coil 88 108 - -
Aip06g01744 134 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 2 51 - -
Aip06g01744 134 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Aip06g01744 134 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 51 - -
Aip06g01744 134 Pfam Protein kinase domain 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01744 Aip-Chr6 39699689 39701827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01744 2 51 Receptor kinase-like Gene Family AT1G70520 88.000 1.28e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip06g01744 Pkinase 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01744 - - ccaj:109816764 97.0561