Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01729 ATGAGGAAGAACATTATTATTAATAATGGCGTATTCCTCGTTTTACTACTCTCATGTTTTCTACCACGTGTTCAATCTGCGGACCCGCAACCAACTTCTGCTATGATACCATCATTTTACACGGAAGAAATTTACAAGGAGATTGAAGCTCTTGCCACAGTTTTAACGATAGATATCAAGAAAAACCTAGGCTACTGCATTAAGGATATAAAAAAAGATTGGCTGGAAGCGTTTGATTTCAAGGGCAAGTTAGATTTCGTCGATGGTTGTGTTAAGCAAAAAGGGGATTTCAGAGATCGGATGTGCACAGCAGCGGAAATAAGGTACTACTTCAGGAGTTTGTTGCAAGGGGGTTCAGATGGGAATTATGTGAAACCAAACAGGAATTGCAACTTGACTTCATGGGTTCCTGGTTGTGAACCTGGTTGGAGTTGTAGTGCTGATGAGCCTATTGATCTCAAGAAGGATAATAAGGAGGAAATTCCTTCTAGAGTTTCAAATTCCCAACCTTGTTGTGAGGGCTTCTTCTGCCCTGAGGGCTTGACTTGCATGATAACTTGCCCCCTTGGTTCGTATTGTCCAATTTCAACACTAGATGCACAAAATGGAGTATGTAACCCATATGGTTACAAGGTCCCTGCAGGGGACAAGAATCATAGTTGTGGTAGTGCTGATACTTGGAGTAGTGCTGTCAACAATACTAACATATTCTGTGAAGCAGGACATTATTGCCCAACTACAACCCAAAAGTCTGTTTGCAATAAGGGATACTATTGCAGGGCTGGATCAACTGATCCAATTGCATGCTCCAAGTTGAGTACCTGTAATCCAGAATCTGAAAGCCAAACGATGCATGCTTATAGTGCTTTGCTCATTGTGGCTTTGAGTACACTCCTAGTCTTCATTTATAATTGTTCTGATCAAGTTCTTGCGACCCGAGAAAGAAGGCAAGCGAAATCCAGAGAACGTGCAGCAAAGCATGTTAGAGAAACGGTGCAAGCACGTGAAAGGTGGAAGATGGCAAAAGATATTGCCAAGAAGCGTACAATGGAGTCGTTGAATCGCACCTTCTCGCGAAGGAAGTCACAGAAGATGTCAGATCTTCCAAATACCATGGCAAATGTAGAGAACAACAAGGAGCCTAGCAACCTCTCCAAGATGATGGATTCCATTGAGAATGATCCCAACAGTCAGGAAGGCTTCGACGTGCAGATTGGAGATAAGAATGTGAAGAAGCAGCAGATGACAAAGGGAAAGAATCTGCATACACATAGCCAGATTTTGAGGTATGCTTATGGCCAGATTGAGAAGGAGAAAGCTCAGCAAGAGAAGAACACTAACTTGACATTCTCAGGAGTGATATCGATGGCCACCGAACAAGGAGAGGAAGTGAGAAAAAGGCCTGTGATTGAGATAGCTTTCAAGGACATAACTCTCACTTTGAAAGGGAAGAACAAGCATCTTCTTAGGTGTGTGTCCGGCAAGTTCATGCCAGGTCGAATTTCAGCTGTCATGGGACCCTCAGGGGCAGGGAAAACCACATTCCTTTCGGCTTTGGTAGGAAAAGCCAGAGGGTGCAATATAACAGGTGAAATTCTTATTAACGGAAAAAATGATTCCATTCACTGTTATAAGAAAATCACTGGTTTTGTGCCACAAGATGATATTGTCCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTATCGGCGGACTTGCCGAAAGCAGATAAGGTTTTGATTGTTGAGAGGGTAATTGAGTCCTTGGGACTTCAGCCAGTGAGGGATTCTCTAGTCGGCACAGTAGAGAAGCGAGGCATCTCCGGAGGACAGAGAAAACGTGTAAATGTTGGCCTGGAGATGGTGATGGAGCCTTCCTTGTTAATCTTAGATGAGCCTACAACTGGCCTTGACAGTGCATCTTCCAGTTTGCTACTTAAGGCTCTTCGACGCGAAGCTCTCGAAGGCGTTAACATTTGCATGGTACTTCATCAACCAAGCTATACTTTGTTTAGAATGTTTGATGATATAGTGTTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGCCCTGTGAAAAATGTAGAAGAATACTTTGCCAGCATTGGGATTCCTGTGCCGGACCGTGTGAATCCTCCAGACCATTTCATTGACATTCTAGAAGGTTTGGTGAAACCGAGTGCAACAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCACAATGGATATGCAGTGCCACCAGATATGCTTCATTTTGTTGATCAAATCGCAGCGGCTTCTGGTGGCGCAACTGTGGTTCCTACAAGTCAGTCAATAAAGGTTACTGAGAATGAGCAATCTTTTTTCTCAGAGTTTTGGGAGGATTTGAGGGATAATATTCAGAGCCAACTAGATCGCCTTGAGGCGATCTTTATGACGTCGAAGGACTTATCGAACCGGAGAACTCCTAGTATAGCCAGGCAGTACAGATATTTTATTGGCCGGGTCGGTAAGCAGCGGCTGAGAGAGGCTAAATTACAAGCTGTAGACTATCTCCTTTTACTAGTTGCTGGTGCTATCTTGGGAATGCTCACTAAAGTGAATGATAACTCATTTGGCTCCCTTGGTTATACATTTACAATCATTGCCGTCTCTCTACTCTGCAAGATTGGTGCCCTAAGATCATTTTCTAATGACAAGTTAAATTACTGGAGGGAGAGCGCCTCTGGGATCAGTAGCCTGGCCCATTTTCTATCTAAAGACACAGTTGATCTTTTCAACACAATCATCAAACCGGTTGTTTTTCTATCCATGTTCTACTTTTTCAGCAATCCGAGGTCAAGCTTTGCAAGTAACTATGTAGTGTTGCTTTGTTTGGTGTACTGTGTGACTGGCATAGCTTATATATTCGCCATCTACTTCGCCTACAGTCTTGCACAGCTGTGGTCAGTGTTGCTTCCTGTGGTTATGACCCTCATTGCAAAACAAAACGACGATTCAATACTCATGCACATTATAATGAAAGTTTGCTACCCAAGATGGGCTTTGGAGGCCTTTGTCATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTAATAACACGATGCACTTCACTGCTGGTGAGTAGGTATAATCTTGGGGACTGGGACTTTTGTCTGATTGCCCTTGTTGTTTATGGTATCGTTGCCAGAATTGTGGCCTTCTTTTGCCTTGTTATTTCCCAAAAGAGGTGA 3240 0.434 MRKNIIINNGVFLVLLLSCFLPRVQSADPQPTSAMIPSFYTEEIYKEIEALATVLTIDIKKNLGYCIKDIKKDWLEAFDFKGKLDFVDGCVKQKGDFRDRMCTAAEIRYYFRSLLQGGSDGNYVKPNRNCNLTSWVPGCEPGWSCSADEPIDLKKDNKEEIPSRVSNSQPCCEGFFCPEGLTCMITCPLGSYCPISTLDAQNGVCNPYGYKVPAGDKNHSCGSADTWSSAVNNTNIFCEAGHYCPTTTQKSVCNKGYYCRAGSTDPIACSKLSTCNPESESQTMHAYSALLIVALSTLLVFIYNCSDQVLATRERRQAKSRERAAKHVRETVQARERWKMAKDIAKKRTMESLNRTFSRRKSQKMSDLPNTMANVENNKEPSNLSKMMDSIENDPNSQEGFDVQIGDKNVKKQQMTKGKNLHTHSQILRYAYGQIEKEKAQQEKNTNLTFSGVISMATEQGEEVRKRPVIEIAFKDITLTLKGKNKHLLRCVSGKFMPGRISAVMGPSGAGKTTFLSALVGKARGCNITGEILINGKNDSIHCYKKITGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKADKVLIVERVIESLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKNVEEYFASIGIPVPDRVNPPDHFIDILEGLVKPSATGVTHEQLPVRWMLHNGYAVPPDMLHFVDQIAAASGGATVVPTSQSIKVTENEQSFFSEFWEDLRDNIQSQLDRLEAIFMTSKDLSNRRTPSIARQYRYFIGRVGKQRLREAKLQAVDYLLLLVAGAILGMLTKVNDNSFGSLGYTFTIIAVSLLCKIGALRSFSNDKLNYWRESASGISSLAHFLSKDTVDLFNTIIKPVVFLSMFYFFSNPRSSFASNYVVLLCLVYCVTGIAYIFAIYFAYSLAQLWSVLLPVVMTLIAKQNDDSILMHIIMKVCYPRWALEAFVIANAERYTGVWLITRCTSLLVSRYNLGDWDFCLIALVVYGIVARIVAFFCLVISQKR 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01729 1079 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 472 713 IPR003439 GO:0005524
Aip06g01729 1079 MobiDBLite consensus disorder prediction 355 382 - -
Aip06g01729 1079 ProSitePatterns ABC transporters family signature. 613 627 IPR017871 GO:0005524
Aip06g01729 1079 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1074 - -
Aip06g01729 1079 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 33 1074 - -
Aip06g01729 1079 MobiDBLite consensus disorder prediction 363 382 - -
Aip06g01729 1079 Pfam ABC transporter 491 640 IPR003439 GO:0005524
Aip06g01729 1079 SMART AAA_5 498 690 IPR003593 -
Aip06g01729 1079 CDD ABCG_EPDR 470 696 - -
Aip06g01729 1079 Pfam ABC-2 type transporter 670 1078 IPR043926 GO:0140359
Aip06g01729 1079 Gene3D - 459 708 IPR027417 -
Aip06g01729 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 695 IPR027417 -
Aip06g01729 1079 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01729 Aip-Chr6 38225140 38232789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01729 499 692 Calmodulin-binding Proteins AT2G36910 29.208 5.06e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01729 - - gmx:100812387 1596.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01729 06 38225140 38232789 Aip06g01729 06 38225140 38232789 ECH