Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01727 ATGTCAATGCCCATTGTTGAGAGAATGAGAGAGCCCCTTAGAGAGATTTCGGTTCATTACTATCCGTTAGCTGGCAGGTTGACATGGACTAAAGTGGTTGAACTTGGAGACTTCTCACTTAATGATCAGTCCGTCAAAGAACTCATCCCAACTGTTGATTACACTCGTCTCATAGAGGAGCTGCCTCTGTTACTAGCACAAGTGACAAAGATACATGGTGGTGAGGCCATCGCCATAGGAATCGCTTGGTCTCATCCATTGGGTGATGGGTCTGCAGCCTTTCATTTCGTCAACTCATGGGCAAAGCTCACCAAAGGATGCACAATGGATGTAAGTGAATTGCCGTTTTTTAACCGCATGGTCCTCAAACCATCCTCACATCTGCCGTCATCGCGACACTTTGATCACCCAAAGTTGAAGCCTTTTCCACTTATCCTCAGAAGAATCGACAACATTGAAGAGCAAAAGAATAAAACGACCTTTGCATAG 489 0.4519 MSMPIVERMREPLREISVHYYPLAGRLTWTKVVELGDFSLNDQSVKELIPTVDYTRLIEELPLLLAQVTKIHGGEAIAIGIAWSHPLGDGSAAFHFVNSWAKLTKGCTMDVSELPFFNRMVLKPSSHLPSSRHFDHPKLKPFPLILRRIDNIEEQKNKTTFA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01727 162 Gene3D - 2 136 IPR023213 -
Aip06g01727 162 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 30 - -
Aip06g01727 162 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 34 160 - -
Aip06g01727 162 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 30 - -
Aip06g01727 162 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 34 160 - -
Aip06g01727 162 Pfam Transferase family 32 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01727 Aip-Chr6 38173767 38174323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01727 9 162 Monolignol Biosynthesis Gene Families AT5G48930 28.249 4.36e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01727 K13065 - gmx:100779814 141.739