Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01708 ATGAAGAACCCTAACATTTCTCCCCTGCAACAACGTACAAACCATACCCTTTCTCCCCTTCCTAACGGCAACAGTAGGTCAACAGCGTTCAATCGCGCGCACTCCTCCATGCACGGCGACGGCACGGTGCTCTCCTCGACGGACGACGGCGCGCGTTCAATCGCGGTGCACTCCTCCACGTACGGTGATGGCGCTGTGCTATCCTCGACGGGCGACGGCGCGGTGCTCTCCACAAGTCCTAACATAGCCACTGCAACAACGCACAGACCCTTTCTCCCCTTCCTAACGGCGACAACAGCGCTCAATCGCGGTGCTCTCCTTGACGGGCGTGGTGCTCAATCACAAGAAACTCCTTTCCCTTCTCTTCTCCTTCTCGTTCTTCCTCTGTTCCTCCGTTTCCAGCATGCCGCTGAAGCATTTCTACATCTTTTGTGCTCATTGAGAGAAAAAATTGGAGGTTGTTTTGCTCCAAAGATGAGTTCTTTAGCAGACATTTTTGCTTCTACTAATAGAATTCTTACTCGAATACATAGGGACTGGCAGAGTGAGCATGAAAGATGGCACCAACTCTACCTTGGACCTTTTGATGGGATTCTTAGTAGCAGCTTGACCTGTCAGAGTTGCTCATCCCAGATCTCAATTAACTTGGAACAATTTGATTGTTTGCCTCTTTCACCTGTACTTAGTGTCTTCATGAGCTCCCTGATAGCTGATGTCTCTCGCTTCAGATATTTGGATGTGCACTGCTGGATTGCCCTGAAGCAATTCATTGTTGCTGAGCATGTTGAGAACTATCACTGCCACTACTGTGACACAAGCAACAAAATTGGGACCTATAGCATTACCTTGTGTACCAATTTTCACAATGTACCTTTTTATGTGGCTGCACCGCTGACTTCAATTGATCTATCACTTTCTTTCGGAGAAGAAATTGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCATGA 1008 0.4851 MKNPNISPLQQRTNHTLSPLPNGNSRSTAFNRAHSSMHGDGTVLSSTDDGARSIAVHSSTYGDGAVLSSTGDGAVLSTSPNIATATTHRPFLPFLTATTALNRGALLDGRGAQSQETPFPSLLLLVLPLFLRFQHAAEAFLHLLCSLREKIGGCFAPKMSSLADIFASTNRILTRIHRDWQSEHERWHQLYLGPFDGILSSSLTCQSCSSQISINLEQFDCLPLSPVLSVFMSSLIADVSRFRYLDVHCWIALKQFIVAEHVENYHCHYCDTSNKIGTYSITLCTNFHNVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVAAS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01708 335 Gene3D - 271 326 IPR042529 -
Aip06g01708 335 MobiDBLite consensus disorder prediction 1 44 - -
Aip06g01708 335 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 270 335 - -
Aip06g01708 335 SUPERFAMILY NagB/RpiA/CoA transferase-like 271 326 IPR037171 -
Aip06g01708 335 SUPERFAMILY Cysteine proteinases 131 278 IPR038765 -
Aip06g01708 335 Pfam Initiation factor 2 subunit family 271 326 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01708 Aip-Chr6 36122257 36125148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01708 271 334 Eukaryotic Initiation Factors Gene Family AT2G05830 73.438 2.24e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01708 K11851 - aip:110263737 256.144