Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01705 ATGACCCCTACTGGCCCTCCTCTAAATTTGCCCCTGCTGCCAGTAATGGGTGGCAAGGACGATTCTGAGTTATGGATGGTGGCTTCTCTTAAATGGCACCAAGCCACCAACAATTCTCAAGGACAGATGGTGCAACAACAAGTTTCAAGTTCTGTTCAGACTTACAAGGTTAGCTCTTTGGATAGCAAGAAGTCTTTAAAGTCTAGTTTTCTTTCTTTCATTGGAGCACATGAGATTTTCATGCCAGAGACATGGAAAACAGCATTGACTGAGTTAGTTGCAACTGCTTCTCTAATGTTCACACTGACATCATCAATCATAGCATGTTTGGATTCACATGAAGTTGCTCCAAAGCTTCTAGTCCCTCTTGCAGTGTTCATCATAGCCTTCTTGTTCCTAATAGTCACAATTCCACTCTCTGGAGGTCACATGAGTCCTGTTTTCACATTCATAGCAGCACTAAAGGGTGTTGTTACTCTTGTACGTGCACTAATTTATGTCATAGCACAATGCATTGGTTCAATTATTGGTTTCATTATGCTAAAATGTGTCATGGATCCAAAATTGGAACACAAATATTCATTGGGAGGATGTGCAATTGGTAATGATAGTGATAAAGGACTAGGATCAAAGCCACAAGTTGCATTGTTAGTAGAATTTTCATGCACCTTTTTGGTGCTATTTATTGGTATTACCTTGGGATTTGATAAGAAAAGGTCAAAGGAATTAGGATTACCTATGGTGTGTGTTGTGATTGCTGGGGCAATGGCATTAGCAGTGTTTGTGTCTATAACTGTTACTGGGCAACCGAGCTATGCAGGTGTTGGACTTAACCCAGCAAGATGTTTAGGCCCAGCTTTACTAAAAGGTGGATTATTGTGGAATGGACATTGGATTTTTTGGGTTGGGCCTTTCTTGGCCTGTATAACATATTATGGAGTATCTATTAATTTGCCAAAGGAGAGTATCACTTTGGAAAATGAAGAATATGATGTGTTGAGTTTAGCTTTGGGCCATAGTAAGAGTATTTCTAGGAGTGCTGTCTCAAATGATCTTCAAGTTTGA 1065 0.4 MTPTGPPLNLPLLPVMGGKDDSELWMVASLKWHQATNNSQGQMVQQQVSSSVQTYKVSSLDSKKSLKSSFLSFIGAHEIFMPETWKTALTELVATASLMFTLTSSIIACLDSHEVAPKLLVPLAVFIIAFLFLIVTIPLSGGHMSPVFTFIAALKGVVTLVRALIYVIAQCIGSIIGFIMLKCVMDPKLEHKYSLGGCAIGNDSDKGLGSKPQVALLVEFSCTFLVLFIGITLGFDKKRSKELGLPMVCVVIAGAMALAVFVSITVTGQPSYAGVGLNPARCLGPALLKGGLLWNGHWIFWVGPFLACITYYGVSINLPKESITLENEEYDVLSLALGHSKSISRSAVSNDLQV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01705 354 PANTHER AQUAPORIN-LIKE 55 346 - -
Aip06g01705 354 SUPERFAMILY Aquaporin-like 81 310 IPR023271 -
Aip06g01705 354 Pfam Major intrinsic protein 82 307 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PRINTS Major intrinsic protein family signature 298 318 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PRINTS Major intrinsic protein family signature 162 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PRINTS Major intrinsic protein family signature 259 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PRINTS Major intrinsic protein family signature 125 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PRINTS Major intrinsic protein family signature 86 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip06g01705 354 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 55 346 - -
Aip06g01705 354 Gene3D Glycerol uptake facilitator protein. 77 326 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01705 Aip-Chr6 35775918 35780517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01705 85 305 Major Intrinsic Protein MIP AT3G54820 28.936 3.36e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01705 K09866 - gmx:100804160 436.032