Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01704 ATGTTAACAATTGGAATAATAAAAAAGACTAACCAATCTGGGATTAAATGGGGATCAGTAAAATTTTTACAGGTGAAGACCTGTTCACGTGAAATAGACTgggatggagacttagTCGTACTCAGTTCCTGCCACATCGCCGTCCTCGTTTCGGTTCCCACCGTCAGTCCGTGGTCCTCTGTTCTCGCCTCCTTGACGTCCTCCGTGCTTGCCGCCTTGCCGTACTCAGTTCCTGCCGTAATGGCATCCAGTAGCAGGGGTCAAGGCGGAATTCAACAGCTGTTGGCTGCTGAACAAGAAGCACAGCAGATTGTGAATGCTGCAAAGAATGAAAAACTGGCTAGGCTGAAACAGGCCAAAGATGAGGCTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTACCAGTTTCAGAAGAAAGTTTCAGAGAGTAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAAACTGAGTCAAAGATCCATCACCTGAAATCCGAGTCTTCAAGAATATCGGGGGATGTTGTCAGCATGCTCCTCAGTTATGTAACAACTGTGAAAAATTAG 576 0.4497 MLTIGIIKKTNQSGIKWGSVKFLQVKTCSREIDWDGDLVVLSSCHIAVLVSVPTVSPWSSVLASLTSSVLAALPYSVPAVMASSSRGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKDEAEKEIAEHRAQLEYQFQKKVSESSGDSGANVKRLEQETESKIHHLKSESSRISGDVVSMLLSYVTTVKN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01704 191 Pfam Vacuolar (H+)-ATPase G subunit 88 190 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip06g01704 191 MobiDBLite consensus disorder prediction 141 170 - -
Aip06g01704 191 MobiDBLite consensus disorder prediction 154 170 - -
Aip06g01704 191 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 85 190 IPR005124 GO:0016471|GO:0046961|GO:1902600
Aip06g01704 191 Coils Coil 91 140 - -
Aip06g01704 191 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 84 191 - -
Aip06g01704 191 Gene3D - 81 191 - -
Aip06g01704 191 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 84 191 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01704 Aip-Chr6 35711288 35715049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01704 89 191 Primary Pumps ATPases(2) AT4G23710 67.961 8.98e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01704 K02152 - gmx:100305477 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01704 06 35711288 35715049 Aip06g01704 06 35711288 35715049 ECH
Aip06g01704 06 35711288 35715049 Aip02g03356 02 110251890 110254181 PCT