Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01703 ATGAAGATTATTCATTCATGTTTTTCTACTTGTTTCTCTGTCAAAGAAGAAACCAAACAAGAAGAAGAGCGGAATAAGGAAGACGAGAGTGATGAAAGCTTTCGGGTCTTCACTTACAGGGAATTGGCATCAGCCACCCGTGGTTTTCATCCCTCTCACAAAATTGGAGAAGGAGGATTTGGTTCTGTCTACAAGGGGATTGATTGGTTTGTTGTGAAGGGGGGGCTCCGGGATGGGACATTGGTGGCAGTGAAAGTGCTTTCCATAGAGATGGAGTCCATGCGAGGAGAGAGGGAGTTTGTGGCTGAATTGGCTACGCTTGCAAATATCAAGCACCAAAATTTGGTGATTCTTAGAGGGTGCTGTGTAGAAGGAGCAAAAAGATATCTAGTCTATGATTACATGGAGAACAACAACCTTCACCACACTTTCTTAGGTTCGGAGGAAAGTAGGATGAGATTCAATTGGGAAGCAAGGAAGGAAGTGTCCATAGGTGTGGCCTCTGTTCTTGCGTTTCTTCATGAGGAACTTAAGCCTCATATTCTGCATAGAGATATCAAATCAAGCAACATCCTTCTTGATCGAGATTTCACACCAAAGGTCTCGGATTTTGGTCTCGCAAAGCTACTAAGAGATGACAAGTCTTATATCAGCACTCGAGTTGCTGGGACATTGGGTTATCTTGCTCCAGAGTATGCTAGTTCCGGACAAGTGTCGCGAAAATCAGATGTTTACAGCTTTGGAGTGCTACTCTTAGAAATTATTAGTGGAAGACCCGTGGTTGGTGCTTATGAAGACATGGAACGTTTCATAGTAGAGAAGGCTTGGGCAGCATATGGAGAGAATGATCTATTAAAAATGGTTGATCCAGTGCTAGATATGAACTATCCTGGGGAGGAGGCGAAACGATTCCTCATGGTGGGTTTGCTTTGCGTTCAAGAAACTGCAAAGATTAGACCGCGGATGCCAGAGGTTGTAGACATGTTGAAGAACAAAAAGGACATGGAATGTGTACAGATTTCGAAACCAGGTTTTGTTGAGGATCTAAGGAACATTAGAATCAGGCAGGAAGTAATGCACTCATCGGAAGAATCAAGTTCTGGTGGAGCAACATTTGCAAGTAGTTCATCATTGACTACTTCTACTCTTGCCCGTTAA 1158 0.4335 MKIIHSCFSTCFSVKEETKQEEERNKEDESDESFRVFTYRELASATRGFHPSHKIGEGGFGSVYKGIDWFVVKGGLRDGTLVAVKVLSIEMESMRGEREFVAELATLANIKHQNLVILRGCCVEGAKRYLVYDYMENNNLHHTFLGSEESRMRFNWEARKEVSIGVASVLAFLHEELKPHILHRDIKSSNILLDRDFTPKVSDFGLAKLLRDDKSYISTRVAGTLGYLAPEYASSGQVSRKSDVYSFGVLLLEIISGRPVVGAYEDMERFIVEKAWAAYGENDLLKMVDPVLDMNYPGEEAKRFLMVGLLCVQETAKIRPRMPEVVDMLKNKKDMECVQISKPGFVEDLRNIRIRQEVMHSSEESSSGGATFASSSSLTTSTLAR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01703 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Aip06g01703 385 PANTHER RECEPTOR-LIKE KINASE 6 377 - -
Aip06g01703 385 Gene3D Transferase(Phosphotransferase) domain 1 135 343 - -
Aip06g01703 385 CDD STKc_IRAK 55 331 - -
Aip06g01703 385 ProSiteProfiles Protein kinase domain profile. 49 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01703 385 Gene3D Phosphorylase Kinase; domain 1 9 134 - -
Aip06g01703 385 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 377 - -
Aip06g01703 385 SUPERFAMILY Protein kinase-like (PK-like) 30 343 IPR011009 -
Aip06g01703 385 MobiDBLite consensus disorder prediction 360 385 - -
Aip06g01703 385 Pfam Protein tyrosine and serine/threonine kinase 52 329 IPR001245 GO:0004672|GO:0006468
Aip06g01703 385 SMART serkin_6 49 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g01703 385 ProSitePatterns Protein kinases ATP-binding region signature. 55 85 IPR017441 GO:0005524
Aip06g01703 385 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01703 Aip-Chr6 35660630 35663381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01703 19 378 Receptor kinase-like Gene Family AT1G07650 43.700 1.59e-88 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip06g01703 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01703 - - gmx:100813945 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01703 06 35660630 35663381 Aip06g01703 06 35660630 35663381 ECH
Aip06g01703 06 35660630 35663381 Aip02g03358 02 110263362 110265330 PCT