Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01702 ATGGAAGCCAGCAGCAGTGTCGTCCAGGACGCATGGTTATGGAGTGGTTCAAGAAAAATTTTATTGACGGAAGAAGGCGATGTTGCTGATGATGACATGCAGGATGAAATGTATGATATGGGAGTTGAGGCAGATGAAGCTCTTGTGCAGGTGGAGGGGACAGCTAGTGGATCCCCAGACCAGTTGATAAACCTGGAAGGTGTTACTGTAGATGATGTTCTTCAAATAGAATTCAGCACTCCCGAAGAAGCAAGTGGTTTCTACAACAACTATAATCGACTGAAAGGCAGGGTTTTCGAGAGAAGAAATGGTTGGAAAAAATTGGATAGGAAAAGGGAGCATAAGGTAGTCACTCGTTGTGGGTGTCTCGCTGAGATGAGGATTAAGAAAAAAGATGAAACCGGGAATTGGTACGTGTCGCGGTTCATTGATGAACATAACCACGAGATGGTATCTGAAAAGTTTGTAAATTATCTAAGATCACATAGGAAGATATCAGAGGTTGAGATTGCTCAGCTGACTAATATGAGGGGAATTGGGATTAGTATTCCAAAGATATACGAATCCTTTGCAGCACAGCTTGGAGGTTTTAATAAGGTTTCTTTCACGAAACAAGATATGTATAACGAGATTAGGAGGCAAAGAGAATTGCAAGGTGGAGATGTGAATGCTGCTATTAGGTTTTTGGAGGGGGTTGCTCGTGTAGATGGTAGAATGTTTTGGCGTCAGGATGATTATGCTGTTTTTGGGGATGTGCTTGCTTTTGATGCAACTTATGGACGTAATAAGTACAACCTACCGGTGGTGGTGTTCTCAGGAGTTAATCATCACAACCAAACCTATGTGTTTGCCACGGCAATGTCAATGGTCGACGAGTGTGGCGTTGTTGATGTAGAGTGGGTGAAAGACTTGTATAGGAAAAAGAATTCCTGGGCGACCGCCTACATACGAGGGAGGTTCTTTGCCGGTATAAGAACCACGTCTCGTTGTGAGTCGTTACATGCTAAGCTTGGGAGGTTTGTTGAGAGTAGGTATAGAGTATTGGAGTTTGTCACTAACTTTCAAAGATGTATAGATTTTCTTCATGATAACGAGGATGAGCTCGAATTTAGGTCATGCTATGGTACTCCCGTGTTGCAAACAGAGTTTGTGGAGCTGAAAAAATCCGGATGGAGTAAATTCACACAAGAGATGTTTTGGAGATTTCGCGAGTCCCTCAGACGATGTGTTCGGGTTAGGATATTTGAAAGCAAGGTTACAGATCAGTGCCACATTTACAGGATTGAAAAGTACCGGCGACCGGATATGAGGTGGATTGTTGTGTGGGAACCTGTCACAAATAATTTCAGGTGCACATGCATGCGGATGGAGTCCTTCGGGCTACCATGTGTGCATATCCTTGCTGTATGTGTTAAGTTGGATTTATGTGCACTGCCCGATAGCCTTGTGTTGCGCAGGTGGGCTAAAACAGCAAAGTTAACGATTGGATCAGGTGAAGAAACAACGGATCACGCAGCAACTTATAGAAGCAGGTTGGGTGCCTTTTCTCAGATATGCAAGAGGTTAGGATGGGTCGCATGCATGAGTGATGAGGACTTCAAGCAATACTCTAAGAAGCTTCTAAGTGATGCAGTTGTGTTGGAAATTTAG 1650 0.4364 MEASSSVVQDAWLWSGSRKILLTEEGDVADDDMQDEMYDMGVEADEALVQVEGTASGSPDQLINLEGVTVDDVLQIEFSTPEEASGFYNNYNRLKGRVFERRNGWKKLDRKREHKVVTRCGCLAEMRIKKKDETGNWYVSRFIDEHNHEMVSEKFVNYLRSHRKISEVEIAQLTNMRGIGISIPKIYESFAAQLGGFNKVSFTKQDMYNEIRRQRELQGGDVNAAIRFLEGVARVDGRMFWRQDDYAVFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTYVFATAMSMVDECGVVDVEWVKDLYRKKNSWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYRVLEFVTNFQRCIDFLHDNEDELEFRSCYGTPVLQTEFVELKKSGWSKFTQEMFWRFRESLRRCVRVRIFESKVTDQCHIYRIEKYRRPDMRWIVVWEPVTNNFRCTCMRMESFGLPCVHILAVCVKLDLCALPDSLVLRRWAKTAKLTIGSGEETTDHAATYRSRLGAFSQICKRLGWVACMSDEDFKQYSKKLLSDAVVLEI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01702 549 Pfam SWIM zinc finger 450 472 IPR007527 GO:0008270
Aip06g01702 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 297 504 IPR031052 GO:0006355
Aip06g01702 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 243 287 IPR031052 GO:0006355
Aip06g01702 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 241 IPR031052 GO:0006355
Aip06g01702 549 ProSiteProfiles Zinc finger SWIM-type profile. 426 474 IPR007527 GO:0008270
Aip06g01702 549 Pfam FAR1 DNA-binding domain 102 151 IPR004330 -
Aip06g01702 549 PANTHER OS02G0262500 PROTEIN 297 504 - -
Aip06g01702 549 PANTHER OS02G0262500 PROTEIN 243 287 - -
Aip06g01702 549 PANTHER OS02G0262500 PROTEIN 98 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01702 Aip-Chr6 35638792 35643176 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip06g01702 FAR1 1.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01702 - - ahf:112717246 513.457