Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01701 ATGGGCAACGCATCGAGTAGCGGCGGCACCACCCGTCGGCGACATGTTGTTTCTAGAAGGACTCATCCACCGCCTCCTCCTCCGGTGACGCCGCAGCCGGAGATCACCTCCAATCCCTTCCTGTATCCCGGAGGCAACCCGTACCCGGCTCAGTACCCGAACCAGAACCGTCCGATGCAATACCCGCAGTACCCTTACCCCGCTTACTACCCTCCGCCGCCGACGGTGCCCTTCCCCCACCACAACCAGCACCAGCACCAACACCAGCCTCAAATGGGGGTCGGGTGGGTTGGCGGCCGAGGTTACCCTTGCGGGACCATGGTGGCTCCTCCAGCACCTATCGTGGAGCACCAGAAGGCCGTGACAATCAGGAACGACGTAAATGTCAAGAAGGAAACATTGAAGATCGAGCCCGATGAGGAGAACCCTGGCCAATTCCTCGTCTCATTCACGTTTGACGCCACGGTTTCTGGCTGCATCACAATTTATTTCTTTGCGAAAGAAAATGAAAGCTGCATTCTAACACCAGTGAAAGAAAACCTTCTCGCACCCATGACGGTTAATTTTCAGCAAGGTCTTGGCCAGAAGTTCAGGCAGCCTGCTGGAAGTGGTATTGATTTTAAAATGTTGAATGAGACAGAATTATTGCAAGTGGGTGAGATGGATGTCTACCCTCTAGTAGTAAAGGCAGATGCATCTCCTAGTAATACCAATGGATCTGATGAAACTACAACATCTAATACCAGAAACTCGCAGATAACACAAGCAGTGTTTGAGAAGGAGAAAGGTGAATTCCGGGTAAAAGTTGTCAAGCAGATTTTGTGGGCAAATGGAATGAGGTATGAGTTGCAGGAGATATACGGTATTGGAAGTTCAACAGAGACTGGTGCAGATGAGAGTGACCAGGGGAAAGAATGTGTCATCTGTTTGACAGAGCCTCGCGACACAATTGTGCATCCCTGCCGACATATGTGCATGTGTAATGGATGCGCAAAGGTTTTGAGGTTCCAGACAAATAGATGCCCAATTTGCAGACAACCAGTTGAGAGGCTTTTGGAGATAAAGGTAGGACCTGAGGAATGA 1083 0.506 MGNASSSGGTTRRRHVVSRRTHPPPPPPVTPQPEITSNPFLYPGGNPYPAQYPNQNRPMQYPQYPYPAYYPPPPTVPFPHHNQHQHQHQPQMGVGWVGGRGYPCGTMVAPPAPIVEHQKAVTIRNDVNVKKETLKIEPDEENPGQFLVSFTFDATVSGCITIYFFAKENESCILTPVKENLLAPMTVNFQQGLGQKFRQPAGSGIDFKMLNETELLQVGEMDVYPLVVKADASPSNTNGSDETTTSNTRNSQITQAVFEKEKGEFRVKVVKQILWANGMRYELQEIYGIGSSTETGADESDQGKECVICLTEPRDTIVHPCRHMCMCNGCAKVLRFQTNRCPICRQPVERLLEIKVGPEE 360
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01701 360 PANTHER MAHOGUNIN 1 359 IPR045194 GO:0061630
Aip06g01701 360 MobiDBLite consensus disorder prediction 232 251 - -
Aip06g01701 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 355 IPR013083 -
Aip06g01701 360 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 305 345 IPR045195 -
Aip06g01701 360 SUPERFAMILY RING/U-box 305 350 - -
Aip06g01701 360 MobiDBLite consensus disorder prediction 1 48 - -
Aip06g01701 360 Pfam Zinc finger, C3HC4 type (RING finger) 304 350 - -
Aip06g01701 360 ProSiteProfiles Zinc finger RING-type profile. 306 345 IPR001841 -
Aip06g01701 360 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 359 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip06g01701 Aip-Chr6 35565055 35568688 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01701 102 325 C3H Transcription Factor Family AT3G09770 60.870 2.25e-95 286
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01701 - - aprc:113862864 481.485
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01701 06 35565055 35568688 Aip06g01701 06 35565055 35568688 ECH
Aip06g01701 06 35565055 35568688 Aip02g03359 02 110275626 110278759 PCT