Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01698 ATGGCATTGTGTAACAAGCTTGGAAATTTCTTGAGACAAAGTGCTTCCGGAAGCAGATTAGCATCTGCTCCATCAATGCTCAATTATATTCGCTGCATGTCCTCAAGCAGGCTTTTCATTGGGGGCCTTTCATATGGAGTTGATGACCAGTCTCTTCGGGATGCATTCTCTGGCTTTGGGGATGTGGTTGATGCAAGGGTGGTCACTGATAGAGACACCGGAAGATCAAGAGGTTTCGGATTTGTCAACTTCTCAAGTGACGAGTCTGCAAGCTCAGCACTCACTGCAATGGATGGGCAGGATCTAAATGGTCGAGTGATCAGGGTGAGCTATGCAAATGATAGGCCTTCTGGACCTCGGGGTGGTGGCGGAGGTTTCGGTGGTGGTGGCGGTTACGGGGGAGGTAGTTACCGTAGAGGTGGAGGTGGTGGTTATGGTGATCCAGCCTTCTAG 453 0.5033 MALCNKLGNFLRQSASGSRLASAPSMLNYIRCMSSSRLFIGGLSYGVDDQSLRDAFSGFGDVVDARVVTDRDTGRSRGFGFVNFSSDESASSALTAMDGQDLNGRVIRVSYANDRPSGPRGGGGGFGGGGGYGGGSYRRGGGGGYGDPAF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01698 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Aip06g01698 150 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 146 - -
Aip06g01698 150 SMART rrm1_1 37 110 IPR000504 GO:0003723
Aip06g01698 150 SUPERFAMILY RNA-binding domain, RBD 32 146 IPR035979 GO:0003676
Aip06g01698 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Aip06g01698 150 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL 1 146 - -
Aip06g01698 150 MobiDBLite consensus disorder prediction 113 150 - -
Aip06g01698 150 Gene3D - 31 148 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01698 Aip-Chr6 35221533 35222557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01698 35 126 Eukaryotic Initiation Factors Gene Family AT1G49760 40.217 9.47e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01698 - - gmx:100499841 186.422