Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01689 ATGTTGCCCGGTGACCCCTTTTCGCTATCCACTTCTCTCGCTGCTGCTGGGTTCACCCAAGACCAAAACTTAAACTCCATCGCAAACCCTAACCCTAAACCTAAACCTAATAGTAATCCCCCTCCAGCCACCAACAAGAAGAAGAGAAACCTTCCAGGAACACCAGATCCAGATGCCGAAGTCATTGCTCTTTCGCCGAAGACGCTCATGGCGACGAACAGATTCATCTGCGAGATATGCAACAAAGGATTCCAGAGGGATCAGAATCTTCAGCTGCACAGGAGGGGACACAACCTGCCATGGAAGCTGAGACAGAGGACGAACAAGGAGGTGAAGAAGAAGGTGTACATCTGCCCGGAGAAGAGCTGCGTCCACCACGAGCCGGCGAGGGCGCTGGGCGACCTGACAGGGATCAAGAAGCACTTCAGCAGAAAGCATGGTGAGAAGAAGTGGAAGTGCGAAAAGTGTTCCAAGAAGTACGCTGTCCAATCTGATTGGAAAGCTCACTCCAAAACCTGCGGCACCAGAGAATATAAATGTGACTGTGGCACCCTCTTTTCCAGGAAGGATAGCTTTATTACTCACAGAGCATTTTGCGATGCATTGGCTGAGGAGAGTGCGAGGCTGAACTCGGTATCTACGTCGACGAATCTGAGTTTCAAGAGCGAAGAGGCAACAACCCAGCAGGGAGTTCTGAATAATAATGTTGGGGGCGGAGTTGGATTTCGATTTGATTTCAATAATGAAATGGGAATGGTTGGTGCAGAACAAGAACAAATTATGAGGCCAAACTTGTTACTTTGGTTGAACCAACAACATGGAAACAACCGTCATCAGATTAATCAATTTGATATGCCATCATCATCAAGCTCTCATCATCAAGTTATGCACATGCCTATGCCTATGTTGCCTAATGATTTTGGAATGCTTGCTCCCAATTCATCAAAGGTATCAGAAGAAGGTGGGGGATCAGATCATAATTCAGGTTTGGCATCTATGTATTCTGAGAATCAAAGCAAGCAATCATCAAAGGCACCTTCACCTTCAACTTATTCTCCTATGTCAGCCACTGCGCTTCTTCAGAAGGCAGCGCAAATTGGGTCCACCAACAACCCTTCAACTTTCAGTGCAAGTTTTGGGCTCATGACCTCTTCATCTTCCATTCAAACCACTACTGCTAGTAATGCAAACCAAAACCAACAGGGAAGAAGAATTGATCAGAGTATTAAGCAGCCAGATCAGTGTTTTAGCGCATTAATGCATTCGTCACAAAGTTTTGATGATCAGTTTTTGAGTAATCATCATCCTGGTTCATCAAGTGCTGCAGGGCATAACAATAATTTTACAAGAGACTTTCTTGGCATGAGTAGAGGACCATTCCTACCCCAAGAGCTAGCAAAGTTTGCTTCCGTAGGCTCATCAATGGGTTTGACCCAATTCACTACTAGCGCAACCCATCAATGA 1464 0.4583 MLPGDPFSLSTSLAAAGFTQDQNLNSIANPNPKPKPNSNPPPATNKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVKKKVYICPEKSCVHHEPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLNSVSTSTNLSFKSEEATTQQGVLNNNVGGGVGFRFDFNNEMGMVGAEQEQIMRPNLLLWLNQQHGNNRHQINQFDMPSSSSSHHQVMHMPMPMLPNDFGMLAPNSSKVSEEGGGSDHNSGLASMYSENQSKQSSKAPSPSTYSPMSATALLQKAAQIGSTNNPSTFSASFGLMTSSSSIQTTTASNANQNQQGRRIDQSIKQPDQCFSALMHSSQSFDDQFLSNHHPGSSSAAGHNNNFTRDFLGMSRGPFLPQELAKFASVGSSMGLTQFTTSATHQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01689 487 Gene3D Classic Zinc Finger 53 128 - -
Aip06g01689 487 MobiDBLite consensus disorder prediction 304 354 - -
Aip06g01689 487 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Aip06g01689 487 Gene3D Classic Zinc Finger 129 208 - -
Aip06g01689 487 PANTHER ZINC FINGER PROTEIN JACKDAW 5 472 IPR033243 GO:0003700
Aip06g01689 487 SMART c2h2final6 116 146 IPR013087 -
Aip06g01689 487 SMART c2h2final6 75 97 IPR013087 -
Aip06g01689 487 SMART c2h2final6 151 171 IPR013087 -
Aip06g01689 487 Pfam Zinc-finger double-stranded RNA-binding 75 97 IPR022755 -
Aip06g01689 487 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 97 IPR013087 -
Aip06g01689 487 MobiDBLite consensus disorder prediction 1 58 - -
Aip06g01689 487 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 472 - -
Aip06g01689 487 MobiDBLite consensus disorder prediction 328 354 - -
Aip06g01689 487 MobiDBLite consensus disorder prediction 12 32 - -
Aip06g01689 487 SUPERFAMILY beta-beta-alpha zinc fingers 74 171 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01689 Aip-Chr6 34585954 34588382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01689 1 472 IDZ Gene Family AT5G03150 47.103 2.85e-127 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip06g01689 zf-C2H2_jaz 7.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01689 K25870 - gmx:100812495 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01689 06 34585954 34588382 Aip06g01689 06 34585954 34588382 ECH