Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01687 ATGAGGAAGACATTTCTGAAGCACTTGCTGTTGCGAGAGGAGGGTGAGGACTCATTCCACCTTGAGATCAGTGTTGGCAGCCTAGTCAGTGCACTTTTAGGTGTAAAGGAGTATGAAACTAGATGGATTGGATTCCATACTTATGATTATGCTAGACATTTTGTAAGTGCTTGTAGTCGCATTCTTGGGCTTGAAGGGACACCTGAAGGAATAGAAGATCAAGGAAAGCTAACTCGTGTGGCTGCGTTTCCTTTTGGGATTGATTCTGATCGGTTTATTCGATTCCTTAAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTTCAGGCAGAAAGGTAATGTTGGGCGTTGATCATTTTGATATGATAAAAGGAATTCCACAGAAGATATTGGCATTTGAAAAGTTCCTTGAGGAGAACTGA 435 0.4161 MRKTFLKHLLLREEGEDSFHLEISVGSLVSALLGVKEYETRWIGFHTYDYARHFVSACSRILGLEGTPEGIEDQGKLTRVAAFPFGIDSDRFIRFLKLPEVQEHMKELKERFSGRKVMLGVDHFDMIKGIPQKILAFEKFLEEN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01687 144 Gene3D Glycogen Phosphorylase B; 28 93 - -
Aip06g01687 144 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 144 - -
Aip06g01687 144 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 144 IPR001830 GO:0003824|GO:0005992
Aip06g01687 144 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 14 45 IPR001830 GO:0003824|GO:0005992
Aip06g01687 144 Pfam Glycosyltransferase family 20 42 144 IPR001830 GO:0003824|GO:0005992
Aip06g01687 144 Gene3D Glycogen Phosphorylase B; 94 144 - -
Aip06g01687 144 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 14 45 - -
Aip06g01687 144 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 40 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01687 Aip-Chr6 34538287 34539631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01687 15 45 Trehalose Biosynthesis Gene Families AT1G78580 77.419 1.56e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01687 K16055 - oeu:111370171 208.764