Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01680 ATGAGCGTCATCGACCTCCTCACCAGAGTCGACTCCATTTGCAAGAAGTACGACAAGTACGACGTCGACAGGCAGAAGGACGCCAACATCTCCGGTGACGATGCCTTCGCCAGGCTCTACGCCGTCGTCGACGCTGACATCGAGGCTGCGCTTCAGAAAGCAGAACAAGCTTCGAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATTAATGCGGAGATTCGTCGTACCAAGGCTAGATTACTGGAAGAGGTCCCTAAACTGCAGAGGCTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATCTAGTTCTTGCATTGCCAGAGAGGATACAAGCTATCCCAGACGGGACCCCTGCAGCACCCAAGCAAACTGGTGGTTGGACAGCTTCTGCATCACGTCCTGAAATCAAATTCGATTCTGATGGGCGATTTGATGATGAGTACTTCCAACAAACTGAGGAATCTAGCCGATTTAGGCAGGAGTATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATAGCAGAAGGATTGGATACCTTGAAAAACATGGCGTCTGATATGAATGAGGAACTGGATAGACAAGTTCCTCTGATGGATGAGATTGATACTAAGGTGGACAAAGCATCTTCTGACCTTAAGAATACCAATGTTAGACTTAAAGACACAGTGATGCAGCTTCGTTCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGGATAGCTGCCTATCTCTATAACGTGCTAAAGAAGTGA 798 0.4624 MSVIDLLTRVDSICKKYDKYDVDRQKDANISGDDAFARLYAVVDADIEAALQKAEQASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWTASASRPEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRMKQDQGLDVIAEGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVMQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01680 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aip06g01680 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Aip06g01680 265 MobiDBLite consensus disorder prediction 121 146 - -
Aip06g01680 265 CDD SNARE_Qc 175 230 - -
Aip06g01680 265 SUPERFAMILY SNARE fusion complex 165 230 - -
Aip06g01680 265 Pfam SNARE domain 207 256 IPR000727 -
Aip06g01680 265 SMART tSNARE_6 165 232 IPR000727 -
Aip06g01680 265 Coils Coil 40 60 - -
Aip06g01680 265 Gene3D - 170 231 - -
Aip06g01680 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Aip06g01680 265 PANTHER SYNTAXIN-73 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01680 Aip-Chr6 34300921 34304144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01680 1 264 SNARE and Associated Proteins AT3G09740 78.947 2.36e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01680 K08506 - gmx:100819272 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01680 06 34300921 34304144 Aip06g01680 06 34300921 34304144 ECH