Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01671 ATGGGTCACTTTGGTTCCAATACTTCAGTTCACTTTTTTTTCACATTCTCCTTGAATTACTCCCATGCCTTCTCTCTCTCCATTAAAGATGTGACGTCCTCCACTGTCGCCGCCGCCGCCGCCGCTCGCGTCGCACGAGCTCCTTCCACCGCCGCTCTCAATGCGTTTGCTCCTTTCGTCGTCACACGAGCTCTCTCGGCCGTGCTCTTGTCTTACGAGCTCCCTCCGCCACCGCTCTCGCGCTGTTTCTTCTCTTCTCGCCAGAGGTCCGCTGAAGGTTACACCATTTATGGTCGAGTGAAGATCCCCAGCAATTTAGGAACAAAAGACTATATAATTCCCGGAAAAGTGTCGAATGTCAAAGTCATACTCAATGGTGGTCAGAAAGGCCAGGGGGACAAGGCTATTTGTGGAAACAAAACTAGGACGAATTCGAGTTTTCAAGCGGCCGCAAAGCAGGCGATTTTGGAAGTAGTTCAAGCTGCACCAAACAGCATAGGATGCTATGCAAGAGGGAAGGTTGATATTTCTGAAAGGGGTCCACCACTGGCTGGAAGGTATGACATGGGAGCTCTATGCATGCATGAGAATTTTGAAAAACTTGAAGGCCTTATCAATGATGCTATAGATAAAGGTGCTGAAATTGTTGCAAGAGGAAGTTTCGGGCCTATTGGTGGAGATGCAGTTGATCAGTGTTACCCCTCAACTGTGATTGTTAATAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAAGGATTAGCTCAGAGTGTGCCGTTCTGACAGATAGCAGGGATTCAATTCCAATTCAAAAATGGAAGTCAATTAACGCTCAGGTGGTTATTGGGACTCCTGGCACCATCAAGAAGTGGATTTCTTTCAAGAAATTGAACCTGACCAGATTGACGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTAAGGTTCTTCTATTTTCTGCCACATTCAACGACATTGTCAAGAACTTTGTTGAGAGGATAGTTAAAAGGGACCATAATAAACTTTCCTTGAAGTTTGGTAAATGTGGTGATTCATATCTTCAAAATTTGCTTCAGGAAAGAGCCAAGGCTTTGGAAGTTATCCAGTATCTGAAGGAAAAGTATCATGAAGGGAAGTGTAATGTTGCCATTGTTGATGATGGAAAGTTGGACACTGAGTCAGACTCAGGTGAATTTTGGGTTCTCTTTGGTGGTTTTGCTCCAATTGGAAAGAAAGGAATTAGTGATGATGATATCATTCCTGAGACAACTCCTGCCCAACTCTTTAGTCACAGGATAGATTGA 1308 0.448 MGHFGSNTSVHFFFTFSLNYSHAFSLSIKDVTSSTVAAAAAARVARAPSTAALNAFAPFVVTRALSAVLLSYELPPPPLSRCFFSSRQRSAEGYTIYGRVKIPSNLGTKDYIIPGKVSNVKVILNGGQKGQGDKAICGNKTRTNSSFQAAAKQAILEVVQAAPNSIGCYARGKVDISERGPPLAGRYDMGALCMHENFEKLEGLINDAIDKGAEIVARGSFGPIGGDAVDQCYPSTVIVNNTEVLRKMGKHTRISSECAVLTDSRDSIPIQKWKSINAQVVIGTPGTIKKWISFKKLNLTRLTILVFDEADQMLAKVLLFSATFNDIVKNFVERIVKRDHNKLSLKFGKCGDSYLQNLLQERAKALEVIQYLKEKYHEGKCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKGISDDDIIPETTPAQLFSHRID 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01671 435 Pfam DEAD/DEAH box helicase 242 331 IPR011545 GO:0003676|GO:0005524
Aip06g01671 435 PANTHER VILLIN-3-LIKE ISOFORM X1 359 431 - -
Aip06g01671 435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 337 IPR027417 -
Aip06g01671 435 Coils Coil 355 375 - -
Aip06g01671 435 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 234 342 IPR014001 -
Aip06g01671 435 Gene3D Severin 358 419 IPR029006 -
Aip06g01671 435 Gene3D - 233 345 IPR027417 -
Aip06g01671 435 PANTHER VILLIN 359 431 IPR007122 GO:0051015
Aip06g01671 435 SUPERFAMILY ALDH-like 178 226 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01671 Aip-Chr6 33908368 33913491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01671 180 284 Aldehyde Dehydrogenase Gene Family AT3G66658 39.844 5.60e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01671 - K18655 aip:110266256 261.922