Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01625 ATGGGGAGAAAAGGAAATTGGTTTTCTTCTGTGAAGAAAGCTCTGAGTCCTGACTCAAAGGAGAAGAAAGAGATTAACCAACTTCCTCTGCAGAAATCAAAGAAGAAATGGTTTGGGAAGCAGAAGTTGCAGAGTTCAGGCTCATACCAGGAATCTGATAAAGCACCACCGCTTCTGCCACCAGAAGATGTTAAATTGGCTGATCTTGAAATTGAAAGCGGTCATGATCGTGTTGTTGAAGTTGCAACTGCTGCAGATGTTGAGGAACCTGTTCCTGCTGTTGCAGTTCAGGCACCAGTGGTTAGGGCTGAAGCTGCTACTACCAGTCATACGATTACTCGGTTCTCTGGCAAACCAAAGGAAGAAGTGGCAGCAATCAAGATTCAAACGGCTTTTCGGGGATACTTGGCAAGAAGAGCACTGCGGGCTTTAAGAGGACTGGTCAGATTGAAGTCATTGATGGAAGGGCCCATTGTTAAGCGCCAAGCGATAAGTACCCTTCGCTCTATGCAGACTTTAGCTCGTGTGCAAGGTCAGATTCGTTCTCGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGCGACAGCTCTTGCAGAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGCGAGGAATGGGATGACAGCTTACAATCGAAAGAACAGATTGAAGCCAAGTTACTGGGCAAGTATGAGGCTGCTATGAGAAGAGAAAGGGCACTGGCTTATGCATTCACTCATCAGCAAAACGGGAAGAGCTCATCTAAATCTATGAATCCCATGTTCATGGATCCAACCAATCCTAGCTGGGGTTGGAGTTGGCTGGAACGATGGATGGCAGCTCGACCTTGGGAGAGCCGTGGCATGATGGATAAAGAGCTGAACGACCATTCATCCATAAAAAGCTCAAGCCGCAGCATTACCGCTGGGGAAATCAGCAAATCATTTGCTCGTTTCCAGCTAAATTCTGAAACGCACTCTCCAACGGCCAGCCAAAATCCCGGCACACCTAGCTTCCAGTCCCATTCGGCTCCTCCCAAGGCACCGGCTTCTCCAGCAGTTGCTAGGAAACTGAAGAAGGGGAGTCCAAAGGGCAGCTTGGTTTTGGAAGATGACTCCAAAAGCATGGTCAGTGTACAGTCAGACCGGTTTCGGAGGCACTCCATCGCCGGATCATCAGTGAGGGATGATGAGAGCCTTGCCAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCAAAGTCCATTAACCATGGAAAATGGGAAAACAGATAAGGGTTCCTTTGGGACTGCAAAGAAGCGTCTTTCTTTTCCGGCTTCACCTGCCAGACCACCCCGGCGGCATTCAGGTCCCCCGAAGATAATAGAAAGCAGTTTAAATGCAGAATTCGCC 1434 0.4868 MGRKGNWFSSVKKALSPDSKEKKEINQLPLQKSKKKWFGKQKLQSSGSYQESDKAPPLLPPEDVKLADLEIESGHDRVVEVATAADVEEPVPAVAVQAPVVRAEAATTSHTITRFSGKPKEEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQAISTLRSMQTLARVQGQIRSRRIRMLEENQALQRQLLQKHAKELESMRIGEEWDDSLQSKEQIEAKLLGKYEAAMRRERALAYAFTHQQNGKSSSKSMNPMFMDPTNPSWGWSWLERWMAARPWESRGMMDKELNDHSSIKSSSRSITAGEISKSFARFQLNSETHSPTASQNPGTPSFQSHSAPPKAPASPAVARKLKKGSPKGSLVLEDDSKSMVSVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKAKSRTQSQSPLTMENGKTDKGSFGTAKKRLSFPASPARPPRRHSGPPKIIESSLNAEFA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01625 478 Gene3D iswi atpase 118 155 - -
Aip06g01625 478 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 476 - -
Aip06g01625 478 SMART iq_5 120 142 IPR000048 GO:0005515
Aip06g01625 478 MobiDBLite consensus disorder prediction 325 347 - -
Aip06g01625 478 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
Aip06g01625 478 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Aip06g01625 478 MobiDBLite consensus disorder prediction 397 438 - -
Aip06g01625 478 MobiDBLite consensus disorder prediction 15 30 - -
Aip06g01625 478 MobiDBLite consensus disorder prediction 325 478 - -
Aip06g01625 478 PANTHER IQ-DOMAIN 5-RELATED 1 476 - -
Aip06g01625 478 Pfam Protein of unknown function (DUF4005) 398 464 IPR025064 -
Aip06g01625 478 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01625 Aip-Chr6 30464867 30467346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01625 1 468 IQD Protein Family AT5G03040 53.623 1.29e-149 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01625 - - gmx:100800080 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01625 06 30464867 30467346 Aip06g01625 06 30464867 30467346 ECH