Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01616 ATGATTCAACCTCAAACCCATTTGAATGTAGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGAAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGACACCTAGCCAGAGGAAAAGCAAGCAAAAGCGATTCCCATAGTAGCGGTGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACAGGGTTGTGGGAGAGCTATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAAAGTCCAGTAGCCGAAAGCATCACTAG 372 0.4677 MIQPQTHLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKKAVPNMSLERSEVIRAVIVRHLARGKASKSDSHSSGERNGSSLNRENRVVGELYKRRAARRSGGVLHPRWRKSSSRKHH 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01616 123 Hamap 50S ribosomal protein L14 [rplN]. 1 110 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 67 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 SUPERFAMILY Ribosomal protein L14 1 67 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 MobiDBLite consensus disorder prediction 104 123 - -
Aip06g01616 123 SMART Ribosomal_L14_2 1 110 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 Pfam Ribosomal protein L14p/L23e 1 66 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 Gene3D Ribosomal protein L14 1 116 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip06g01616 123 MobiDBLite consensus disorder prediction 68 123 - -
Aip06g01616 123 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01616 Aip-Chr6 30416445 30417374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01616 8 65 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 40.323 2.62e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01616 K02874 - ming:20832736 115.161