Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01593 ATGTCTGACCCAACAACACAACCAACTATGCTCCCTTTCTTCAACCAATCCATGGAACTCGTCCAACTCCCCAACCCAACCGCAACCCGAATCCGAAGCCGAACCGGTTTCTCCCCCACCCTCGGCGAGCTCCTCAAACACGTAGAAGATGCTCAAAACGACAACCCTAACGCACCAACACAACATGTTCTCGATCTCAATTCTACTCCTAACTCCTCTCACCCTTTTGTTCTCTCCTTCACCAACTTAACCTACAGTGTTAAGGTCCGTCGCAAGATGATCCTGTCTCCATGCTTCACCTACTCAAACCATGACTTGCTGCCGGAGAACGACGCCACGGACGCAAAAACCGATAACGCCGCCACCAAGATTCTCCTAAATGATATCTCCGGTGAGGCGAGGGACGGCGAGATCATGGCGGTACTCGGTGCCAGTGGCTCCGGGAAGTCTACCTTGATCGACGCCCTTGCAGACCGGATCTCCAAGGAGAGCCTCAAGGGAAGTATAACGCTAAACGGAGACGTTTTGGAGTCCAGGATGTTGAAGGTTATCTCCGCTTACGTCATGCAGGACGACCTCCTCTTCCCCATGCTCACCGTGGAGGAAACCCTAATGTTCTCCGCCGAGTTCCGCCTCCCTCGCTCCCTATCCAGGTCCAAGAAGAAGGCTCGCGTTCATGCCCTCATCGACCAGCTCGGCCTCCGCAACGCCGCCACCACCGTCATCGGCGATGAAGGCCACCGCGGTGTCTCCGGAGGTGAGCGCCGACGCGTCTCCATCGGGATAGACATTATCCACGATCCGATCGTCCTCTTCCTCGACGAGCCAACCTCCGGCCTTGACTCCACCAGCGCCTTCATGGTAGTGAAGGTGCTTCAGCGAATCGCACAGAGCGGGAGCATCGTAATCATGTCAATCCACCAACCAAGCTACCGCATCCTCGGCCTCCTCGACCGCCTGATCTTCCTGTCCCACGGCCAAACCGTATTCAGCGGCTCTCCAGCGAACCTCCCGCCGTTCTTCTCAGAGTTCGGCCACCCCATACCGGAGAACGAGAACCGTACGGAGTTCGCTCTTGACTTAATCCGCGAGCTGGAAGAAGCTCCCGGCGGCACAAAAGGTCTCGTGGACTTCAATAAACAGTGGCAACTCAAGAACAAGAGAATTTCCGAGAAAACCCTCAGCGGAATACCGAAAGTGTCCCTGAAGGACGCAATCAGCGCAAGCATTTCCAGGGGTAAACTCGTCTCAGGGGCGCCAGCTGGCACCAGTACCAGTAACGACTCCAACCAACTCGCAGCGGCATCATCAGTCCACACGTTCGTGAATCCATTCTGGATCGAGATGGCGGTTATAGCAAAACGGTCTCTAACAAACTCACGGAGGATGCCCGAATTATTCGGGATCCGCTTGGGTGCAGTACTAGTGACTGGTGCCATCCTCGCCACCATGTTTTACCACCTCGATAACTCTCCCAAGGGCGTTCAGGAGCGGTTAGGGTTCTTCGCATTCGCTATGTCCACCACCTTCTACACCTGCGCTGAAGCCATCCCCGTCTTCCTCCAAGAACGCTACATCTTCATGAGAGAAACTGCCTACAATGCCTACCGCCGCTCCTCCTACGTCCTCGCTCACTCCATCATCTCCGTCCCTTCTTTAGTCTTCCTCTCCTTCGCCTTCGCCGCCACCACCTTCTGGGCGGTGGGACTCGCCGGAGGCACCACCGGCTTCCTCTTCTACTTCCTCACCATTGTGGCCAGCTTCTGGGCGGGGAGCTCCTTCGTGACGTTCCTCTCCGGCGTGGTTTCTCACGTGATGCTTGGCTTCACCGTGGTGGTTGCGATTCTAGCGTACTTTTTACTCTTCAGTGGATTCTTCATCAGCAGGGACAGAATCCCACCGTACTGGATATGGTTTCACTACATATCTCTGGTGAAGTACCCGTACGAGGGAGTGTTGCAGAACGAGTTCGATCTGAATCCACCAAGATGCTTTGTTAGAGGGACGCAGATGTTCGACAGTACGCCGCTGATGGAGGTGCCGGAGGCGTTGAAAGTGGAGCTGCTGAAGAGTATGAGCAAGACGCTGGGGATTAACATCACGAGTTCCACGTGCGTGATTACCGGAGCAGATGTGCTGAAGCAGCAGGGTGTGACGCAGCTGAGCAAGTGGAACTGCCTTTGGATAACGCTCGCTTGGGGTTTCTTCTTCCGTTTCCTTTTCTACTTGACTCTTCTTTTTGGAAGCAAGAATAGGAGAAGGTAA 2265 0.5483 MSDPTTQPTMLPFFNQSMELVQLPNPTATRIRSRTGFSPTLGELLKHVEDAQNDNPNAPTQHVLDLNSTPNSSHPFVLSFTNLTYSVKVRRKMILSPCFTYSNHDLLPENDATDAKTDNAATKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGSITLNGDVLESRMLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSRSKKKARVHALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQTVFSGSPANLPPFFSEFGHPIPENENRTEFALDLIRELEEAPGGTKGLVDFNKQWQLKNKRISEKTLSGIPKVSLKDAISASISRGKLVSGAPAGTSTSNDSNQLAAASSVHTFVNPFWIEMAVIAKRSLTNSRRMPELFGIRLGAVLVTGAILATMFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISVPSLVFLSFAFAATTFWAVGLAGGTTGFLFYFLTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFLLFSGFFISRDRIPPYWIWFHYISLVKYPYEGVLQNEFDLNPPRCFVRGTQMFDSTPLMEVPEALKVELLKSMSKTLGINITSSTCVITGADVLKQQGVTQLSKWNCLWITLAWGFFFRFLFYLTLLFGSKNRRR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01593 754 Pfam ABC-2 type transporter 451 657 IPR013525 GO:0016020|GO:0140359
Aip06g01593 754 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 747 - -
Aip06g01593 754 Pfam ABC transporter 126 278 IPR003439 GO:0005524
Aip06g01593 754 SMART AAA_5 135 350 IPR003593 -
Aip06g01593 754 ProSitePatterns ABC transporters family signature. 250 264 IPR017871 GO:0005524
Aip06g01593 754 Gene3D - 115 339 IPR027417 -
Aip06g01593 754 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 350 IPR003439 GO:0005524
Aip06g01593 754 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 36 747 - -
Aip06g01593 754 Pfam ABC-2 type transporter 307 386 IPR043926 GO:0140359
Aip06g01593 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01593 Aip-Chr6 29758073 29760797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01593 125 310 Calmodulin-binding Proteins AT2G36910 30.159 4.98e-12 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01593 06 29758073 29760797 Aip06g01593 06 29758073 29760797 ECH