Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01563 atgcCCTTGAAGTTTGGTAAATGTGGTGATTCATATCTTCAAAATTTGCTTCAAGTTGGAGAAGGTGGCACCCAACTTTCTGGAGGACAGAAGCAGAGAATTGCTATAGCTGATTGGGAATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGATGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGGTAGGCTCTGGGCCTTGTGGCTTTGCCAAACATTCGCTGGTATCCTCTGCATAATTCTTGGGCTTGTTAGATCTTTGAGTGTTTATGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCAAGCTACTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGACGGTACTACTATTTCAGCACATGA 432 0.4306 MPLKFGKCGDSYLQNLLQVGEGGTQLSGGQKQRIAIADWEFNLKLHTAGIIAASFGLANLFSRPDGGFISDAVSKRFGMRGRLWALWLCQTFAGILCIILGLVRSLSVYVVVMIIFSVFVQATCGMTFGIVPFVSRRYYYFST 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01563 143 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 40 137 - -
Aip06g01563 143 SUPERFAMILY MFS general substrate transporter 41 136 IPR036259 -
Aip06g01563 143 Gene3D - 18 34 IPR027417 -
Aip06g01563 143 Gene3D MFS general substrate transporter like domains 35 139 IPR036259 -
Aip06g01563 143 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 40 137 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01563 Aip-Chr6 28171503 28176328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01563 40 137 Inorganic Solute Cotransporters AT1G12940 67.347 1.27e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01563 K02575 K22191 ahf:112727541 198.749