Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01548 ATGGATGGTCATACACAAAAATGGTTGGAAAAAGCGAAGCCATTCATAGGTGTGATTTTCTTGCAGTTTGGATTTGCCGGCATGGATGTTCTATCCAAGGCTGCACTCAACAAGGGAATGAGCAATTATGTTCTTGTTGTTTATCGCCATGTTGTTGCCTTCATTGTCATAACCCCCTTCGCATTAGTCATTGACAAGAAAGTGAGGCCAAAGATGACATTTTCAATCTTTATGAAGATGGTGGCACTAAGCATACTAGAGCCAGTTATTGATCAGAATTTATACTTTTTGGGAATGAAATACACAACAGCAACCTTTGCCGCTGCCATGACCAATATGCTTCCTGCCATTACCTTTGTCTTGGCCTGCATTCTTAGGCTTGAGAAGGTGAAAATAAGAAGTGTACGGAGTCAAGCAAAGGTGGTTGGGACTCTAGCAACTGTTGCAGGTGCCATGGTTATGACACTGCTTAAAGGCCCAGAGCTCTTCGGGGCCCATGGAAGCAATACCCATAACCAGCATAATAATGGGGTAAACCTTCATGATGTCATTAAGGGTTCCATCATGATCACTGTTGGCTGCTTTAGTTGGGCTTGTTTCATGGTTCTTCAATCTGTTACACTAGAAGCGTACCCTGCTGAGCTGTCACTTACATCATGGATATGCCTATTGGGAACAATTGAAGGTGGCTTAGTGGGCCTAATTATGGAAAGGGCTAATCCTTCTGCATGGACTCTACATTGGGATACAAAACTACTTGCTGCTGCCTACAGTGGCATATTTTGCTCTGGACTAGCCTATTACATTCAAGGAGTAGTCATGAAAACTAGAGGTCCAGTCTTTGTAACAGCATTTAGTCCTCTCTGTATGGTCATTGTTGCTATCATGGGCTCCATTTTTCTCGCTGAGCAAATGTTCCTTGGAAGGGTGGTTGGTGCCATTGTGATTATTTTGGGGCTGTACATGGTGGTTTGGGGCAAAAGCAAAGACTATGACTCACCAAATCCAAGTATTGAAGATAACAGTAATGCCAAAAATCAGTATCTTACTCAAGAAGGCATGAATGGTAAGGAAAACATAGCTAGAGATGAACAAGTATGA 1101 0.426 MDGHTQKWLEKAKPFIGVIFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFIVITPFALVIDKKVRPKMTFSIFMKMVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFVLACILRLEKVKIRSVRSQAKVVGTLATVAGAMVMTLLKGPELFGAHGSNTHNQHNNGVNLHDVIKGSIMITVGCFSWACFMVLQSVTLEAYPAELSLTSWICLLGTIEGGLVGLIMERANPSAWTLHWDTKLLAAAYSGIFCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIFLAEQMFLGRVVGAIVIILGLYMVVWGKSKDYDSPNPSIEDNSNAKNQYLTQEGMNGKENIARDEQV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01548 366 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Aip06g01548 366 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020|GO:0016021
Aip06g01548 366 PANTHER WAT1-RELATED PROTEIN 9 344 - -
Aip06g01548 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
Aip06g01548 366 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016021|GO:0022857
Aip06g01548 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01548 Aip-Chr6 27583737 27587259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01548 9 363 Nodulin-like Gene Family AT2G37460 64.986 5.58e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01548 - - gmx:100777050 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01548 06 27583737 27587259 Aip06g01548 06 27583737 27587259 ECH
Aip06g01548 06 27583737 27587259 Aip02g01287 02 28574042 28578074 PCT