Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01545 ATGCAGGTTTTCCAGGTTTTCCAGTTTTCCAGGTATCCAACTGAGCTGTCTAGAAGAGCCAAAATTAACTCAGTAATGGATTGGCAACATTCTAATTTACGAAATGGAGCAGGTAGATACATTCTAATTTCAATTTTGAACTCTTTTAAATTGAAAATGAGTAGGCGTGGGAGCAGAATAGTCTACGTTGGGAACCTCCCTGGTGATATTCGTGAAAGAGAAGTAGAAGATTTGTTTTCAAAGAAAATTCAGCAGATTGGCGCCAACTTTGCATTTATGATTGGAGGTAGGAAACTAATAACCAATGCACATTGTGTGGAACATGATACACATGTTAAAGTTAAGAGAAGAGGGGATGATACAAAATACGTGGCTAAAGTGTGTCTCTATGAAGTAGAAAGTGATGAATTCTGGAGAGATGTGGAACCTCTCAGATTAGGACGATTGTCGCATCTTCAGGATTCTGTTAGTGTGGTGTGA 480 0.3875 MQVFQVFQFSRYPTELSRRAKINSVMDWQHSNLRNGAGRYILISILNSFKLKMSRRGSRIVYVGNLPGDIREREVEDLFSKKIQQIGANFAFMIGGRKLITNAHCVEHDTHVKVKRRGDDTKYVAKVCLYEVESDEFWRDVEPLRLGRLSHLQDSVSVV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01545 159 Gene3D - 11 58 - -
Aip06g01545 159 PANTHER PROTEASE DO-LIKE 2, CHLOROPLASTIC 81 159 - -
Aip06g01545 159 PANTHER - 81 159 - -
Aip06g01545 159 SUPERFAMILY RNA-binding domain, RBD 35 81 IPR035979 GO:0003676
Aip06g01545 159 SUPERFAMILY Trypsin-like serine proteases 90 153 IPR009003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01545 Aip-Chr6 27384376 27386451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01545 12 46 Glutathione S-transferase Gene Family AT5G41210 62.857 5.86e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01545 K25896 - adu:107474898 118.627