Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01540 ATGGCCGGAAAAGGAGAGGGACCAGCCATCGGAATCGATCTCGGAACCACGTACTCGTGCGTCGGAGTTTGGCAGCATGACCGTGTTGAGATCATCGCCAACGACCAAGGAAACAGAACGACGCCGTCCTACGTCGCATTCACCGACGCCGAGCGTCTCATAGGCGATGCCGCCAAGAACCAGGTCGCCATGAACCCTATCAACACTGTCTTCGATGCCAAGAGGCTGATTGGTCGCAGATTTAGCGATCCCTCTGTGCAGAGTGATATTAAGTTGTGGCCATTTAAGGTTATTTCTGGACCTGCTGAGAAGCCCATGATTGTGGTTAACTACAAGGGTGAAGAGAAACAATTTGCCGCAGAAGAGATCTCTTCTATGGTACTCATGAAGATGCGTGAGATTGCGGAGGCGTATCTTGGCTCTTCAGTGAAGAACGCTGTTGTTACTGTCCCTGCTTACTTCAATGATTCTCAGCGTCAGGCAACCAAGGATGCTGGTGTTATTGCTGGTCTTAATGTCATGAGAATTATCAATGAGCCTACTGCTGCTGCCATTGCATATGGTCTTGACAAGAAGGCAACAAGCGTTGGTGAGAAGAATGTCTTGATTTTTGATCTTGGTGGAGGTACTTTTGATGTATCCTTGCTTACTATTGAGGAAGGTATCTTTGAGGTGAAGGCTACAGCTGGAGACACCCATCTTGGGGGCGAAGATTTTGATAACAGAATGGTGAACCACTTTGTTCAGGAGTTTAAGAGAAAGAACAAGAAGGACATAAGTGGCAACCCTAGAGCTCTTAGGAGGTTGAGGACAGCTTGTGAGAGGGCAAAGAGGACTCTTTCGTCTACTGCCCAGACCACCATTGAAATTGATTCGCTGTATGAGGGAATTGATTTCTATTCTCCAATTACTCGTGCAAGGTTTGAGGAGCTCAATATGGATCTTTTCAGGAAGTGTATGGAGCCGGTTGAGAAATGTTTGAGAGATGCTAAAATGGACAAAAGAAGTGTCCATGATGTTGTCCTTGTTGGCGGTTCAACTAGAATTCCCAAGGTTCAACAACTTTTGCAAGATTTCTTCAATGGAAAGGAATTGTGCAAGAGCATTAATCCTGATGAGGCTGTTGCCTATGGTGCTGCAGTTCAGGCTGCCATCTTGAGTGGTGAGGGCAATGAAAAGGTTCAGGACCTACTCCTTCTTGATGTCACCCCTCTGTCACTTGGTTTGGAGACTGCTGGTGGTGTGATGACCGTCCTGATCCCAAGGAACACTACAATTCCAACAAAGAAGGAACAAGTTTTCTCAACATATTCGGACAACCAGCCTGGTGTGTTGATCCAGGTCTTCGAGGGTGAGAGAACAAGGACAAGGGATAACAATTTGTTGGGCAAATTTGAACTTTCAGGCATTCCTCCTGCTCCCAGGGGTGTTCCACAGATCACTGTGTGTTTTGACATTGATGCCAATGGTATCTTGAATGTGTCTGCGGAAGACAAAACTACTGGCCAGAAGAATAAGATCACCATCACCAATGACAAGGGAAGACTTTCAAAGGAAGATATAGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCTGAGGATGAAGAGCATAAAAAGAAGGTTGAAGCCAAGAATGCTTTGGAAAACTATGCATACAACATGAGGAACACCGTGAAGGATGACAAGATTGGAGGAAAACTTGACCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGAGCAATCTATTCAGTGGCTAGACAGCAACCAGCTTGCCGAAGCAGATGAGTTTGAGGATAAGATGAAGGAACTGGAAAGCATCTGCAATCCAATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCTGATGTTGGTGGAGCTGGTGCAGCCGAAGATGACTATGCTCCCTCTGGTGGAAGTGGTGCTGGCCCTAAGATTGAGGAAGTCGACTAA 1956 0.4642 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDAERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVISGPAEKPMIVVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSSVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGGKLDPADKKKIEDAIEQSIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDVGGAGAAEDDYAPSGGSGAGPKIEEVD 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01540 651 Gene3D - 546 619 IPR029048 -
Aip06g01540 651 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Aip06g01540 651 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Aip06g01540 651 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Aip06g01540 651 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Aip06g01540 651 Gene3D Actin; Chain A, domain 4 235 318 - -
Aip06g01540 651 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Aip06g01540 651 MobiDBLite consensus disorder prediction 620 651 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 8 21 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 36 48 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 58 66 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 146 166 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 209 219 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 337 353 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 369 389 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 396 415 - -
Aip06g01540 651 PRINTS 70kDa heat shock protein signature 477 493 - -
Aip06g01540 651 Coils Coil 521 541 - -
Aip06g01540 651 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Aip06g01540 651 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Aip06g01540 651 Gene3D - 71 126 - -
Aip06g01540 651 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Aip06g01540 651 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Aip06g01540 651 Gene3D - 10 384 - -
Aip06g01540 651 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Aip06g01540 651 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Aip06g01540 651 Gene3D - 192 366 - -
Aip06g01540 651 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01540 Aip-Chr6 27259110 27262113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01540 1 651 Calmodulin-binding Proteins AT3G12580 92.320 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01540 K03283 - gmx:100798307 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01999 04 92612638 92613108 Aip06g01540 06 27259110 27262113 ECH
Aip03g00465 03 4532314 4535370 Aip06g01540 06 27259110 27262113 ECH
Aip06g01540 06 27259110 27262113 Aip06g01540 06 27259110 27262113 ECH