Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01507 ATGACAAGTCGAAATTTATCGACCCAATTAAGAGCTCTTGTCGTAGATGACAACATGATCAACCGAAAGATTCATCAAAAGATGTTGAATGGTTTGGGAGTGGAATGCATGGGAGTAGCAAATGGAAAAGAAGCTGTAGATGTTCACGGTTATGGTCAAAGCTTTGACCTCATTCTTATGGACAAGGATATGCCCATCATGAATGGCATTGAGGCAACAAAAAAGCTTCGGTCAATGGGCATTTGCAGCATGATTGTTGGTGTGTCATCACGTTCAATGGACGTGGAAATAAGAGAATTTATGGAAGCTGGCTTAAATGATTACCATGAGAAACCATTGACAACTGCTAAGCTTGCTTCCATTATTCATCATATCATCAACACCAAATAA 390 0.3949 MTSRNLSTQLRALVVDDNMINRKIHQKMLNGLGVECMGVANGKEAVDVHGYGQSFDLILMDKDMPIMNGIEATKKLRSMGICSMIVGVSSRSMDVEIREFMEAGLNDYHEKPLTTAKLASIIHHIINTK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01507 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 127 - -
Aip06g01507 129 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Aip06g01507 129 Gene3D - 5 129 - -
Aip06g01507 129 SMART REC_2 10 122 IPR001789 GO:0000160
Aip06g01507 129 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Aip06g01507 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 127 - -
Aip06g01507 129 SUPERFAMILY CheY-like 9 127 IPR011006 -
Aip06g01507 129 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01507 Aip-Chr6 25617197 25619002 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01507 10 127 Response Regulator Gene Family AT3G04280 48.333 7.32e-32 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g01507 Response_reg 1.7e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01507 - - adu:107491646 250.751