Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01475 ATGGATGCATTTGCAAATCAAGAAGATGAAAATGGAGTGATTGCTGAAAGCTCTGCATTTGTTAAAGGGGAAGTTCCAGCAGAATATAGCGTCCCGCCGAAAGTTGATTCTGAAGTTAAAGTCCTTCACGAGAAGGTCACTAAGCAAGTAATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTTATTCATTACAGGGGTTGGTCTGAAAGCACCCTGCACAAGTTTGAAGACACGTGGCAAGAACAGCGACCAATTGAGATGGTATTAGGAAAAGAAAAGAAAGAAATGACTGGCTTGGCCATTGGTGTGGCAAACATGAAAGATGGTGAGCGTGCATTGCTACGTGTGGGTTGGGAATTAGGATATGGCGAGGAAGGAAGTTTTTCTTTCCCCAATGTTCCTCCCAGGGCAGATTTAGTTTATGAAGTTGAGCTTATTGGCTTTGATGAAACGAAAGAAGGAAAAGCTCGCAGCGATATGACTGTGGAGGAAAGGATTGGTGCAGCAGATCGTAGAAAGATGGATGGAAATGTTTTGTTTCAGCAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTTCAGCTGTTTGGGAAATATAGGGATATGGCTTTGGCTGTAAAGAACCCATGCCATCTTAACATGGCAGCTTGTCTGATTAAGCTGAACCGTTATGAAGAAGCTATAGGACAATGTACAATTGTACTGACTGAGGATGAAAACAATGTCAAGGCTCTATTTAGGAGAGGCAAGTCTAGGGCAGCACTTGGGCAAATAGATCCTGCCAAGGAAGATTTTCAAAAGGCACGCAAGTATGCCCCTGAAGACAAAGCGATTGCAAGAGAATTAAGGTTGCTTGCTGAACACGACAAAGTTGTTTATCAAAAGCAGAAAGAACTATACAAAGGAATCTTTGGACCAAGGCCAGATCCAAGATCTAGTAATAAGCGAAGTGGTAACTTGCTGATTCTCATTTGGCAGTGGTTGCTTTCACTATTTTATGGCCTTGTTAATCTCTTCAAGCGTAAAAGCCCCAAATCTGACTAA 1095 0.421 MDAFANQEDENGVIAESSAFVKGEVPAEYSVPPKVDSEVKVLHEKVTKQVIKEGHGQKPSKYSTCFIHYRGWSESTLHKFEDTWQEQRPIEMVLGKEKKEMTGLAIGVANMKDGERALLRVGWELGYGEEGSFSFPNVPPRADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNVLFQQEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCTIVLTEDENNVKALFRRGKSRAALGQIDPAKEDFQKARKYAPEDKAIARELRLLAEHDKVVYQKQKELYKGIFGPRPDPRSSNKRSGNLLILIWQWLLSLFYGLVNLFKRKSPKSD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01475 364 Pfam Tetratricopeptide repeat 261 291 IPR019734 GO:0005515
Aip06g01475 364 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 26 322 - -
Aip06g01475 364 Gene3D - 30 155 IPR046357 GO:0003755
Aip06g01475 364 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 26 322 - -
Aip06g01475 364 SMART tpr_5 174 207 IPR019734 GO:0005515
Aip06g01475 364 SMART tpr_5 259 292 IPR019734 GO:0005515
Aip06g01475 364 SMART tpr_5 225 258 IPR019734 GO:0005515
Aip06g01475 364 SUPERFAMILY FKBP-like 24 160 - -
Aip06g01475 364 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 58 151 IPR001179 GO:0003755
Aip06g01475 364 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Aip06g01475 364 SUPERFAMILY TPR-like 166 305 IPR011990 GO:0005515
Aip06g01475 364 Gene3D Tetratricopeptide repeat domain 156 287 IPR011990 GO:0005515
Aip06g01475 364 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 154 IPR001179 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01475 27 322 Calmodulin-binding Proteins AT3G25230 31.833 6.20e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01475 - - gmx:100790587 615.15