Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01457 ATGTCTACAACACTACCTTCTTCTTCTTCTTCTGTTGGATCGTCTCATACCCTTTTCAATGAGATCCTTTCTTTGCCAGTTCTGGAACTTGTAGCAACGTGTGCCAACTTGGCACTGCTGCTTGTGTTTCTCATTGTTATCTTTTCAAGAAAGGTGCTTGGGAACGTGGGAAGTGTTAGATATGACAATAAGGATGATATTGCAAGCAATGGTGGCGCAGTTAGTCCTAGAATTGTTGATGCACAAACACATGAAGTTAGGATTGGTACATGGTTCAAGCTTTCGGTCTTGTCTTGTCTCTATGTTCTGTTGGTGCAACTTGTGGTGTTGGGTTTTGATGTTGTAGCTTTGATTCAGGGAAAGGGTAATTTGTCTGTAATTTTGTTGCCAGTTTCTCAGGGCTTGTCTTGGATTGTGTTGAGCTTCTTGGCTTTAAATTGCAAGGCTCAGAGGCTTGATAGGTTTCCATTTTTGTTGAGAGTTTGGTGGAGTGTGTCATTTGTTATTTGCTTGTGCACTTTGTATGTTGATGGGAGAGGGTTATGGGATGAAGGTTACAAGCATTTGCAGTCCCATGTGGTGGCGAATTTTGCTGCCACGCCTGCACTTGCCTTCTTGTGTATTGTTGCGGCTAGGGGTGTTACTGGTATTGAAGTCTGTGGGGATTCGGATTTTCGAGAGCCGTTGCTTGCTGAAGAAGAATCAGGGTGTGTGAAGGTTACTCCATACAGTGATGCTGGAATTTTTAGCCTGGCTACTCTGTCTTGGCTGAACCCAATTCTTTCCCTTGGCGCAAGGCGACCATTGGAGCTTAAGGACATTCCCCTAGTGGCACGAAAAGATCGAGCTAAGACAAATTACAAGATTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAAAATCCGTCCGGACAGCCTTCGTTAGCTTGGGCACTTCTCAGATCATTTTGGAAGGAAGCAGCTTGGAATGCCATCTTTGCTGGTTTGAATACTCTTGTTTCTTATGTTGGTCCTTACATGGTAAGCTACTTTGTTGATTACTTGAGTGGCAAACAAAGTTATCCGAACGAGGGCTATGTCCTCGCTGGGATCTTCTTCGTGGCGAAGCTTGTTGAGACCTTTACAACTCGTCAATGGTATCTAGGAGTGGATATCTTGGGCATGCATGTTAGATCAGCTCTAACAGCGATGGTGTATCGAAAGGGGCTTAGACTCTCGAGCTTAGCGAGGCAAAGTCACACAAGTGGAGAGATTGTTAACTACATGGCTGTAGATGTTCAAAGAGTAGGGGACTACTCTTGGTACCTTCATGATATGTGGATGCTTCCTATGCAGATTGTTCTTGCCCTTCTAATCTTGTACAAGAACGTTGGAATTGCTTGTATTGCAACACTGATTGCTACCATCATTTCAATTGTTGTCACTGTTCCAGTAGCTAGGATCCAAGAAGATTATCAAGACAAGTTAATGGCTGCAAAAGATGAAAGGATGCGAAAAACATCTGAGTGCTTAAGGAACATGAGGATTCTCAAGTTGCAAGCTTGGGAAGACAGGTATCAAATAAAGTTAGAGGAGATGCGTGGAGTCGAGTTCAAATGGCTTCGAAAAGCGTTGTACTCGCAAGCTTTCATAACATTCATATTCTGGAGCTCCCCCATTTTTGTTTCAGCTGTCACTTTCGCTACATGCATATTGCTGGGTGGAGAGTTGACTGCAGGTGGTGTGCTTTCTGCTTTGGCTACTTTTAGAATCCTCCAAGAACCTCTCAGGAATTTTCCGGACTTGGTTTCAACAATGGCTCAGACTAAGGTTTCGATTGATCGAATATCTTCTTTCCTGCTTGAGGAAGAGTTGCAGGAAGATGCAACTATTGTCTTACCTCATGGAATCTCTAATGTTGCAGTAGAAATTAAGGATGGTATCTTCTGTTGGGACCCTTCATCATCTTCTAGACCAACTCTATCAGGGATTCATATGAAGGCCGAAAAAGGAATGCGTGTGGCTGTTTGTGGTATGGTTGGTTCCGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCGTTCCGGCGAAGTAAGGGTGTGCGGCTTGTCTGCATATGTCTCGCAATCAGCATGGATACAGTCTGGAAACATAGAGGAAAATATTCTGTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCTCTTAAGAAGGACTTGGAGCTTTTCTCACATGGTGATCAAACAATTATTGGTGATAGAGGCATAAACCTGAGTGGTGGCCAGAAGCAGCGTGTTCAGCTCGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTTAGTGCAGTTGATGCTCACACCGGATCAGAATTGTTTAGGGAGTATATATTGACAGCACTAGCAAATAAAACAGTAATCTATGTGACACATCAAGTTGAATTTCTTCCTGCTGCTGATTTGATACTGGTTCTCAAAGAAGGCTGCATCATACAAGCTGGAAAATATGATGATCTCTTACAAGCAGGAACAGATTTTAATGCTCTAGTTTCTGCTCACCATGAAGCCATAGAGGCTATGGAAATTCCTAGTTTCTCATCTGAAGATTCCGAAGAACATTTATCCTTAAATGCATTGGTTATATCCAGTAAGAAGTCTATTTGTTCCACAAATGATATTGACAATTTGGCAAAGGAACTGCAAGAGGGATCATCGAATTCAGATCAAAAAGCGATTAAGGAGAAGAAGAAAACAAAACGCTCAAGGAAAAAGCAACTAGTTCAAGAAGAGGAGAGGGTCAGAGGTAGAATCAGCATGAAGGTTTATTTGTCATACATGGCAGCAGCATATAAAGGGTTATTGATTCCTCTCATAATCATGGCGCAAACGTTATTTCAGTTTCTACAGATTGCTAGTAATTGGTGGATGGCTTGGGCTAACCCACAAACTGAAGGAGACCTGCCGAAAGTATCTCCCACAGAGCTTCTTGTCGTTTACATGGCCCTCGCTTTCGGCAGCTCCTGCTTTATATTTGTAAGGGCTATTCTGGTGGCTACATTTGGCCTTGCAGCAGCTCAGAAGCTGTTCTTGAAGATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTCGACTCTACACCTGCCGGACGGATCTTGAATCGTGTATCAGTTGATCAAAGTGTTGTGGATCTTGACATTCCTTTCAGACTCGGTGGCTTCGCTTCGACAACAATACAACTTATTGGTATTGTTGGTGTGATGACAGAAGTCACATGGCAAGTTTTGCTCCTAGTTATCCCAATGGGTGTTGCTTGTTTGTGGATGCAGAAATACTATATGGCTTCCTCGAGGGAACTAGTCCGAATTGTAAGCATCCAGAAGTCTCCAATTATAAATCTTTTTGCTGAATCAATTGCTGGAGCATCTACAATAAGAGGATTTGGACAAGAAAAGAGGTTTATGAAGCGAAATCTCTATCTTCTAGATTGCTTTGCTCGGCCATTCTTCTGCAGTCTTGCTGCTATCGAATGGCTCTGCTTGCGGATGGAGTTACTGTCAACTTTTGTATTTGCTTTCTGCATGGTATTACTTGTAAGCTTCCCCCATGGAAGCATTGATCCCAGCATGGCTGGACTTGCTGTGACTTATGGACTCAATTTGAATGCACGTTTATCGAGATGGATACTTAGCTTCTGCAAACTCGAAAATAAAATCATTTCTATTGAAAGAATTTACCAATACAGTCAAATTCCAAGTGAAGCACCAGCAATCATTGAAGATTTTCGCCCTCCACCCTCATGGCCCGAAAATGGAACAATTGAAATAATTGATCTGAAGGTGCGGTACAAGGAGAATCTTCCTGTGGTACTTCATGGAGTGTCATGCACATTTCCAGGCGGAAAAAAGATCGGAATAGTTGGACGTACCGGTAGTGGCAAATCAACTTTAATTCAGGCATTGTTTCGGTTGATTGAACCATCTGATGGGAGGATACTTATAGACAACATTGATATTTTACATATTGGTCTTCATGATCTTAGGAGTCATCTAAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATCCGTGGCAATCTTGATCCTCTTGAGGAGCACTCTGATCAACACATCTGGGAGGCATTGGACAAGTCTCAACTTGGAGATGTTATCCGTGAAAAGGACCAAAAGCTTGACACACCAGTGCTGGAAAATGGAGACAATTGGAGCGTAGGACAGCGGCAACTTGTTTCCCTAGGCCGAGCTCTTCTGAAGCAATCAAAAATACTTGTACTCGATGAAGCAACAGCATCAGTTGATACTGCCACTGATAATCTTATCCAGAAGATTATCCGTGATGAGTTTAAAGATTGTACTGTCTGCACCATTGCGCATCGCATTCCAACCGTTATAGACAGTGATCTTGTTCTAGTACTTAGTGATGGTAGAGTTGCAGAATTCGACACTCCATCGCGACTATTAGAGGATAAAACCTCCATGTTTTTGAAGTTGGTGGCGGAGTATTCGTCAAGGTCAAGTGGCATCCCAGCAGGATAG 4584 0.4269 MSTTLPSSSSSVGSSHTLFNEILSLPVLELVATCANLALLLVFLIVIFSRKVLGNVGSVRYDNKDDIASNGGAVSPRIVDAQTHEVRIGTWFKLSVLSCLYVLLVQLVVLGFDVVALIQGKGNLSVILLPVSQGLSWIVLSFLALNCKAQRLDRFPFLLRVWWSVSFVICLCTLYVDGRGLWDEGYKHLQSHVVANFAATPALAFLCIVAARGVTGIEVCGDSDFREPLLAEEESGCVKVTPYSDAGIFSLATLSWLNPILSLGARRPLELKDIPLVARKDRAKTNYKILNSNWERLKAENPSGQPSLAWALLRSFWKEAAWNAIFAGLNTLVSYVGPYMVSYFVDYLSGKQSYPNEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLARQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKNVGIACIATLIATIISIVVTVPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYQIKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGELTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSIDRISSFLLEEELQEDATIVLPHGISNVAVEIKDGIFCWDPSSSSRPTLSGIHMKAEKGMRVAVCGMVGSGKSSFLSCILGEIPKRSGEVRVCGLSAYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIYVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMEIPSFSSEDSEEHLSLNALVISSKKSICSTNDIDNLAKELQEGSSNSDQKAIKEKKKTKRSRKKQLVQEEERVRGRISMKVYLSYMAAAYKGLLIPLIIMAQTLFQFLQIASNWWMAWANPQTEGDLPKVSPTELLVVYMALAFGSSCFIFVRAILVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVIPMGVACLWMQKYYMASSRELVRIVSIQKSPIINLFAESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDFRPPPSWPENGTIEIIDLKVRYKENLPVVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPSDGRILIDNIDILHIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDQHIWEALDKSQLGDVIREKDQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRDEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKTSMFLKLVAEYSSRSSGIPAG 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01457 1527 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1281 1515 IPR003439 GO:0005524
Aip06g01457 1527 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Aip06g01457 1527 Pfam ABC transporter 1298 1446 IPR003439 GO:0005524
Aip06g01457 1527 Gene3D - 1264 1517 IPR027417 -
Aip06g01457 1527 CDD ABCC_MRP_domain1 635 835 - -
Aip06g01457 1527 CDD ABC_6TM_ABCC_D2 962 1256 IPR044726 GO:0140359
Aip06g01457 1527 Pfam ABC transporter transmembrane region 967 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01457 1527 Pfam ABC transporter transmembrane region 325 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01457 1527 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Aip06g01457 1527 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 81 1525 - -
Aip06g01457 1527 MobiDBLite consensus disorder prediction 908 932 - -
Aip06g01457 1527 Coils Coil 919 939 - -
Aip06g01457 1527 Gene3D - 615 877 IPR027417 -
Aip06g01457 1527 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 859 IPR003439 GO:0005524
Aip06g01457 1527 Coils Coil 280 300 - -
Aip06g01457 1527 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01457 1527 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 81 1525 - -
Aip06g01457 1527 CDD ABCC_MRP_domain2 1279 1499 - -
Aip06g01457 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1272 1506 IPR027417 -
Aip06g01457 1527 SUPERFAMILY ABC transporter transmembrane region 962 1261 IPR036640 GO:0005524|GO:0016021
Aip06g01457 1527 SUPERFAMILY ABC transporter transmembrane region 310 615 IPR036640 GO:0005524|GO:0016021
Aip06g01457 1527 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Aip06g01457 1527 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 964 1234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip06g01457 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
Aip06g01457 1527 SMART AAA_5 1307 1492 IPR003593 -
Aip06g01457 1527 SMART AAA_5 663 844 IPR003593 -
Aip06g01457 1527 Gene3D ABC transporter type 1, transmembrane domain 293 614 IPR036640 GO:0005524|GO:0016021
Aip06g01457 1527 Gene3D ABC transporter type 1, transmembrane domain 923 1262 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01457 Aip-Chr6 24431556 24438760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01457 635 852 Calmodulin-binding Proteins AT2G36910 31.197 5.69e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01457 - - gmx:100790550 2526.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01457 06 24431556 24438760 Aip02g01104 02 21554227 21561376 PCT