Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01441 ATGGCGCCAAATCCAAAGGTGGTAGCAGCCTATCGGGCAATGGCAAATCTTGGGATTCATGAATCAAAAGTGAAGCCAGTACTAAAGAAGCTCCTTAAGTTGTATGATAAAAACTGGGAGCTTATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGAGGAAAATCCGATGTCATCCTTACTTGTAAATAATCAGGAAGCAGAGTTAGATGATGAAGTGCAAGATCAGCCACTGCGACCTAAAAAGAGGTTGCGCTTGAGAGGTCCAGAGTTTCAGTCTTCAAATAATCAGATTAGCAGTGGTCCCAGTTCAGCTGCTTTTCCATTGAAAACTCCTAAATTAGAAGATGACACGGTACCTGGAAATGGTTCTATACTGCATGCTCAAAGTGCTGCAGCATTATCTGATGGAAATGGAATGATTGAAGCTCATCAAGTTCATTCACAAGAAGGCATTATTGACAAGGGAAAGAAACCTGTATCACCTCAAGTTACTCCCAGAGGAAGAAGATCTACATCGGATGGAGTGCCACCAGCAGTACTACCTAAAGAACCAGCAGTTGAACCGCTGAGCACTTTGTCTCCAAGAAGCAAAATGGCCCATCCTCTTGTATGGATCAAGCCCAAGGATGAGCCAATTGATGACGCACGAGATAATGAGGCTCCCATTTCAATGATTCTTCCTGAACCATCTAGTGGAAAGGATTCTTCAATGATGAATGGTGCAGCTGGACAGCAAGATTGTGACGACACTGTGGCATCACATTGCATAAATGATGAAGTTGCTGGTGAAGATAACCTCCGCTCTTCAAATGAAGATGCCCCTTCTACTGTAGAGATAGGCTCATCACCTATACAAGAGGAAGGATCTGCAAAGATAACAACACCAAACATCAGCATGCCAAAGGAATCTGAGTCACATGATGCTCTGGTTGCCGGAGGAAATGAAGATCCAGTTACACCTTGCATTTCAAATGGATCTGCCAATGTTAATTCTTATTCTTCCTTGCCCACTACTGAAATTCCAGTTTCTCTGCCCTGCCCGCGTGGTCTGGATGACACTTCACCAGTTCCCCAGGAGGTTGGAAATAATGATTGCTTAGCAAGTGATGATGGAAGGGAGCTAGTGGATCCTATATCTAATAATTCTCATAGTTTAGTTACTGTTCCAAAGAATCAGCTTACTACTAATGCTATAATGACTGTTCACGATGTTAATGACATAACAAAGGGTGAAGAAAAAGTGAAAATTTCATGGGTCAATAACATTACTGATGATTTCCCACCATCCTTTCATTACATACCCCGAAACCTTGTATTCCAAAATGCTTATGTTAGTATTTCTCTGTCTCGCATTGGGAATGAAGATTGCTGTTCTACTTGCATAGGCAATTGTGTCTTGTCTTCTGAATCATGTTCTTGTGCGAATAAAACTGGTGGTGGATTTGCCTACACTGCACAAGGCCTACTGAAGGAAGAGTTCTTGGATGAGTGCATTGTCATCAGCTGCAACCCTAAAAATTGTTTCTATTGTGAAGACTGCCCAGTTGAAAGATCAAAGAATGATGATTGTTCAGAACCATGTAAAGGACACTTAAGGAGGAAGTTTATTAAGGAATGCTGGAGTAAATGTGGCTGTGGTAAAAAATGTGGCAATCGGGTTGTCCAGCAAGGAATAACTTGCAACTTGCAGGTGTTTTTAACTTCTGAAGGAAAAGGTTGGGGTCTTCGGACGTTAGAGGACCTTCCCAAAGGGGCATTTGTATGTGAGTTTGTTGGAGAAATTCTAATCGTCAAAGAATTGCATGAGAGGAGCCTAAAATATCCCAAAAATAGGAAATATACATACCCAATTCTATTGGATGCAGATTGGGAATCAGGAGGTGTGGGGGATAAAGAAGCACTTTGCTTGTATGCAGCATCTTATGGAAATGCTGCTAGGTTTATTAATCACAGATGTTTAGATGCTAACTTGATTGAGATCCCCGTTGAAATTGAGGGCCCAGATCATCACTACTATCATGTGAGAAGTTAG 2049 0.4173 MAPNPKVVAAYRAMANLGIHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEEENPMSSLLVNNQEAELDDEVQDQPLRPKKRLRLRGPEFQSSNNQISSGPSSAAFPLKTPKLEDDTVPGNGSILHAQSAAALSDGNGMIEAHQVHSQEGIIDKGKKPVSPQVTPRGRRSTSDGVPPAVLPKEPAVEPLSTLSPRSKMAHPLVWIKPKDEPIDDARDNEAPISMILPEPSSGKDSSMMNGAAGQQDCDDTVASHCINDEVAGEDNLRSSNEDAPSTVEIGSSPIQEEGSAKITTPNISMPKESESHDALVAGGNEDPVTPCISNGSANVNSYSSLPTTEIPVSLPCPRGLDDTSPVPQEVGNNDCLASDDGRELVDPISNNSHSLVTVPKNQLTTNAIMTVHDVNDITKGEEKVKISWVNNITDDFPPSFHYIPRNLVFQNAYVSISLSRIGNEDCCSTCIGNCVLSSESCSCANKTGGGFAYTAQGLLKEEFLDECIVISCNPKNCFYCEDCPVERSKNDDCSEPCKGHLRRKFIKECWSKCGCGKKCGNRVVQQGITCNLQVFLTSEGKGWGLRTLEDLPKGAFVCEFVGEILIVKELHERSLKYPKNRKYTYPILLDADWESGGVGDKEALCLYAASYGNAARFINHRCLDANLIEIPVEIEGPDHHYYHVRS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01441 682 MobiDBLite consensus disorder prediction 94 111 - -
Aip06g01441 682 SMART set_7 566 680 IPR001214 GO:0005515
Aip06g01441 682 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Aip06g01441 682 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 680 - -
Aip06g01441 682 Gene3D - 1 60 IPR043017 -
Aip06g01441 682 SMART preset_2 410 550 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip06g01441 682 Pfam Pre-SET motif 413 558 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip06g01441 682 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 680 - -
Aip06g01441 682 MobiDBLite consensus disorder prediction 72 118 - -
Aip06g01441 682 Pfam SET domain 578 663 IPR001214 GO:0005515
Aip06g01441 682 CDD SET_SETDB-like 434 680 - -
Aip06g01441 682 SUPERFAMILY SET domain 420 680 IPR046341 -
Aip06g01441 682 Gene3D SET domain 400 681 IPR046341 -
Aip06g01441 682 MobiDBLite consensus disorder prediction 155 189 - -
Aip06g01441 682 MobiDBLite consensus disorder prediction 268 287 - -
Aip06g01441 682 MobiDBLite consensus disorder prediction 77 93 - -
Aip06g01441 682 ProSiteProfiles Pre-SET domain profile. 462 563 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip06g01441 682 ProSiteProfiles SET domain profile. 566 682 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01441 Aip-Chr6 23847950 23852744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01441 479 680 C2H2 Transcription Factor Family AT2G23740 33.028 4.13e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip06g01441 Pre-SET 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01441 - - gmx:100788602 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01926 09 59245515 59261093 Aip06g01441 06 23847950 23852744 PCT