Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01440 ATGTCGCTGGGTCTTCCGGTGGCGGCTACGGTGAACTGCGCCGACAATACTGGTGCCAAGAACCTCTACATCATCTCCGTTAAGGGGATCAAGGGCCGCCTTAATCGTTTGCCTTCCGCTTGCGTCGGCGACATGGTGATGGCCACCGTCAAGAAGGGGAAGCCTGATCTCCGTAAGAAGGTGCTGCCAGCTGTCATCGTCCGCCAGCGCAAGCCCTTCCGCCGAAAGGACGGTGTTTACATGTACTTCGAAGATAATGCTGGAGTCATTGTGAATCCCAAGGGTGAAATGAAAGGTTCCGCTATCACTGGTCCAATTGGAAAGGAGTGTGCTGATCTATGGCCTAGGATTGCAAGCGCAGCCAATGCCATTGTTTGA 378 0.5397 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPFRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01440 125 Gene3D Ribosomal protein L14 1 125 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip06g01440 125 Pfam Ribosomal protein L14p/L23e 7 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01440 125 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01440 125 Hamap 50S ribosomal protein L14 [rplN]. 4 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip06g01440 125 PANTHER 60S RIBOSOMAL PROTEIN L23 1 125 - -
Aip06g01440 125 SUPERFAMILY Ribosomal protein L14 3 125 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip06g01440 125 ProSitePatterns Ribosomal protein L14 signature. 64 90 IPR019972 -
Aip06g01440 125 SMART Ribosomal_L14_2 4 125 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01440 Aip-Chr6 23839890 23840746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01440 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 98.400 1.38e-87 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01440 K02894 - aof:109841233 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01440 06 23839890 23840746 Aip02g01083 02 21074928 21077266 PCT