Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01414 ATGATAGGAAGTGAAAGCCACATCGTAGGGAGCTTGAAGCAGTCATCGTCGACAGCAAACTGGGCAAGAAACACGCTTCCTCCATGGCTTGATGCCAGCCTCCCTGGAGACTTTAGGTTTGATCCACTTGGTCTGGAGTTTGATCCAAAGAGCCTGAGATTGAATGTACAGGCAGAGCTAGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTTCCGAATTTTTAACAAGTCAAGCTGTGTCAACACCGACCCTATATTCCCAAACAACAAGTTCACTGGCACCCATGTTAGTTACCCTGGTGGCCTCTGGTTTGACCCTCTCGAATGGGACTCTCCTAAAAAGATCAAGGAATTGA 369 0.4905 MIGSESHIVGSLKQSSSTANWARNTLPPWLDASLPGDFRFDPLGLEFDPKSLRLNVQAELVHCRWAMLGAAGIFISEFLTSQAVSTPTLYSQTTSSLAPMLVTLVASGLTLSNGTLLKRSRN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01414 122 Pfam Chlorophyll A-B binding protein 27 105 IPR022796 -
Aip06g01414 122 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 23 93 - -
Aip06g01414 122 SUPERFAMILY Chlorophyll a-b binding protein 20 88 - -
Aip06g01414 122 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 93 IPR001344 GO:0009765|GO:0016020
Aip06g01414 122 Gene3D Chlorophyll a/b binding protein domain 17 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01414 Aip-Chr6 23147688 23148056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01414 24 91 Chloroplast and Mitochondria Gene Families AT3G61470 69.565 3.02e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01414 K08908 - tcc:18609005 106.301