Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g01401 ATGAAATCGGATTATGGAAGTAATACTGCCAAATTAAAGGAGATGGGAGAGCTTTCAGCTCCCCCTGGTTTTGCATCGCTTACATCTTTCATTTTGAAAAAGGGTAAAAAGGTTACAGAAAATGACAAACGTGCAACCTGTCTGAATGAAACTAAGCACGTGCCAGTTGATGCAGACGGTAAAAACGACGTGAATGATATTGGTACATATTACCAGATTTTTAAGAATCGACCCTGGATACTCTCTGACCAGAGCAAGAGCAACGACAAACCTGAGGAGTCTCACACTGAATTTATTCCTATGGATCACTCGTCAAATGCTAGTCGTCCAAAAGGGATCACTCGTGGATGTCCAAACTGCAATAATTGTTTGAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAACGAGAGAAGCCCTTGAAGAAGCTCCTCTTTTCAACCCAACAGAAGAGGAATTCAATGACACCCTCAAATATATTGCAAGCATACGATCTAGCGCAGAGCCTTATGGAATTTGTCGTATTGTACCTCCTACTCGCTGGAAACCACCATGTTCTCTTGAGGAAAAGAACTTATGGGAAGGCTCTGAATTTGTTGCTCAAATTCAACGAATAGATGGAATCCAAGTTCAGCATGCAGAAGAAAATGTGGCTAGTTCTTGTGAAGATACAAAGGCTAAGAGAAGAAGGGTGACACCAGTAGATTTGGACTCTCATCTTGCGAATGCAAGCACTTGCACCATAAATAGTCAGGGTGTTGAAGATTGTGTCTCTGAACCCTGTCCTAAATTCAGTCTCGAGACGTTTAAGAATTTTGCTGATGAATTCAAAATCCAGTACTTTGATTACAAGGGCAAGAATAAGAATGTGGGTTCTGATTTAAATTTAGCTACAAATCAACATAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAATATGGAAGGATTGTTCAAAATCCAACTGAAAAAATTGAGGTGCTTCATGGTAACACTTTGGAGGCTGAAGGTTTTAGCAGTGGATTTCCTACAGCTGCTGATTCTGGGGAGGAACACATTTCCCCTGAATATTTGAAATCTGGATGGAACTTAAACAACATAAATTCATTGCCTGGTTCTCTTCTTTCTTTTGAAAGTTCTGGTGCTTCACATAATTTTGGTCATCGAATTCATGTTGGAATGTGCTTCACTCTGCAAAAATGGGTAATGTCGCTGACTTACAGTATACTTGCATCTTCATCACAAGAAAGAAATTTACGAAGATATGCTGCCAACTATGAAACAATTAGGAAGAAGTATTTATCAGGTCTGCATGCAAGACAGCCTGATATTGATGATAATCTGATGATGCAGTTATCCTGCTTCATATTGAAGGCAGAGGGCATACCTGTATATCGCTGTGTTCAATATCCTCGTGAGTTTGTTCTTGTCTTCCCAGGAGCATATCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTAAACTTTGCTCCTCTCGAGTGGCTTCTTCATGGACTGAATGTGGTAGAGCTATATTGTGAGAAGAGGAAAAAGACATTAATTTCGTATGATAAACTTTTGCTGGGAGGAGCAAAGGAAGCTGTAAGGGCACGATGGGAAATCGATCTGTGTATGAACGACATGACAGATAAATTAACATGTAAAGATGCGTATCAAAGAAACGGGATCTTAGCAAAAGCTCTGGATGCTCGTGTTAAGAGCGAAAGTATCAAGAGAGAATACCTATGCAGTTCTTTGAAATCACAAAGAATGGATGAAAGTTTTGACACTTGTATCAAAAGGGAATGCGGCATATGTCTGTGTGATTTACACTTGTCTGCTGTACATTGTTTGTGTTCAGAAGACAAGTTTGCGTGCCTGGATCATGCGAAACAGCTTTGTCCATGCAGTTGGAGCAACAAAATCCTCCTCTACCGTTATGAAATTAGCGAGTTGAATGTTCTTTGTCAAGCTTTGGAAGGAAAGTTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTTGGATTAAGATTTCAGTCTGTTGCCTCCAATAGATCAAAACAAATGAAACAAAACGAAGCGGCATCAGGAATCGTGGGGAATCCTCGCGGCAATTGTATTAGTTCTTTCAGCATTACCCCAAAAGAGAAGACGAAAGCAAAAGAGAAAACGTTGGGGGGCCGACCTCCTAGATCATGTGCTAATGGAGGAACCAATTCCACCAGTATCAAAACTGATATGAAGGCACCTGTGGCAAAATACATTAGTCGAAGTGCCATCTGA 2289 0.4063 MKSDYGSNTAKLKEMGELSAPPGFASLTSFILKKGKKVTENDKRATCLNETKHVPVDADGKNDVNDIGTYYQIFKNRPWILSDQSKSNDKPEESHTEFIPMDHSSNASRPKGITRGCPNCNNCLKVTARWHPEDATREALEEAPLFNPTEEEFNDTLKYIASIRSSAEPYGICRIVPPTRWKPPCSLEEKNLWEGSEFVAQIQRIDGIQVQHAEENVASSCEDTKAKRRRVTPVDLDSHLANASTCTINSQGVEDCVSEPCPKFSLETFKNFADEFKIQYFDYKGKNKNVGSDLNLATNQHKWEPSVENIEGEYGRIVQNPTEKIEVLHGNTLEAEGFSSGFPTAADSGEEHISPEYLKSGWNLNNINSLPGSLLSFESSGASHNFGHRIHVGMCFTLQKWVMSLTYSILASSSQERNLRRYAANYETIRKKYLSGLHARQPDIDDNLMMQLSCFILKAEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVNFAPLEWLLHGLNVVELYCEKRKKTLISYDKLLLGGAKEAVRARWEIDLCMNDMTDKLTCKDAYQRNGILAKALDARVKSESIKREYLCSSLKSQRMDESFDTCIKRECGICLCDLHLSAVHCLCSEDKFACLDHAKQLCPCSWSNKILLYRYEISELNVLCQALEGKLSAVYKWAKEYLGLRFQSVASNRSKQMKQNEAASGIVGNPRGNCISSFSITPKEKTKAKEKTLGGRPPRSCANGGTNSTSIKTDMKAPVAKYISRSAI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g01401 762 Pfam C5HC2 zinc finger 605 655 IPR004198 -
Aip06g01401 762 SMART cupin_9 356 515 IPR003347 -
Aip06g01401 762 Pfam JmjC domain, hydroxylase 392 498 IPR003347 -
Aip06g01401 762 Gene3D Cupin 128 499 - -
Aip06g01401 762 MobiDBLite consensus disorder prediction 1 23 - -
Aip06g01401 762 MobiDBLite consensus disorder prediction 717 746 - -
Aip06g01401 762 Pfam jmjN domain 144 177 IPR003349 -
Aip06g01401 762 ProSiteProfiles JmjN domain profile. 143 184 IPR003349 -
Aip06g01401 762 ProSiteProfiles JmjC domain profile. 343 515 IPR003347 -
Aip06g01401 762 MobiDBLite consensus disorder prediction 82 110 - -
Aip06g01401 762 PANTHER LYSINE-SPECIFIC DEMETHYLASE 91 695 - -
Aip06g01401 762 SUPERFAMILY Clavaminate synthase-like 260 541 - -
Aip06g01401 762 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 91 695 - -
Aip06g01401 762 SMART JmjN_1 142 183 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g01401 Aip-Chr6 22607211 22612237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g01401 19 726 JUMONJI Transcription Factor Family AT1G08620 41.997 1.36e-167 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip06g01401 JmjC 2.6e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g01401 - - adu:107491746 1489.17